RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 GHRHRQ02643 423 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 UBE2SQ16763 222 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 LY6KQ17RY6 165 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 FAM47CQ5HY64 1035 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 C1orf53Q5VUE5 145 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 USP17L6PQ6QN14 398 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 PDCD2LQ9BRP1 358 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 PRO3102Q9H379 93 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 TMEM39AQ9NV64 488 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 MAP3K20Q9NYL2 800 aaKnown RBP9.7□□□□□ -0.86
USP16-202ENST00000399973 Q9Y3F1 56 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 ELP1O95163 1332 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 TRIM43BA6NCK2 446 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 ARVCFO00192 962 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 EIF3JO75822 258 aaKnown RBP9.69□□□□□ -0.86
USP16-202ENST00000399973 CABYRO75952 493 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 GH1P01241 217 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 SMARCA1P28370 1054 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 FXR1P51114 621 aaKnown RBP eCLIP9.69□□□□□ -0.86
USP16-202ENST00000399973 NAPAP54920 295 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 ARHGAP1Q07960 439 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 ITGA7Q13683 1181 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 TDHQ8IZJ6 230 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 BADQ92934 168 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 KCNB2Q92953 911 aa9.69□□□□□ -0.86
USP16-202ENST00000399973 TRIM43Q96BQ3 446 aaPredicted RBP9.69□□□□□ -0.86
USP16-202ENST00000399973 MTG1Q9BT17 334 aaPredicted RBP9.69□□□□□ -0.86
USP16-202ENST00000399973 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
USP16-202ENST00000399973 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 GBF1Q92538 1859 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 A0A1W2PPC1 479 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 SPDYE3A6NKU9 549 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 MMP3P08254 477 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 CDC27P30260 824 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 NKX3-2P78367 333 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 PURAQ00577 322 aaKnown RBP9.68□□□□□ -0.86
USP16-202ENST00000399973 FAAP100Q0VG06 881 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 GNPTABQ3T906 1256 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 CCDC62Q6P9F0 684 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 ANKRD33Q7Z3H0 272 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 FAM126BQ8IXS8 530 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
USP16-202ENST00000399973 SAMD3Q8N6K7 520 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 PSTPIP2Q9H939 334 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
USP16-202ENST00000399973 NID2Q14112 1375 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 FRMPD4Q14CM0 1322 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 CCDC196A0A1B0GTZ2 297 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 GGPS1O95749 300 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 ZNF286BP0CG31 522 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 UBA1P22314 1058 aaKnown RBP9.67□□□□□ -0.86
USP16-202ENST00000399973 BMP8BP34820 402 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 ADCY7P51828 1080 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 RCAN1P53805 252 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 SP4Q02446 784 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 FPGSQ05932 587 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 RUFY3Q7L099 469 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 PGBD1Q96JS3 809 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 RTEL1Q9NZ71 1219 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 DDX41Q9UJV9 622 aaKnown RBP9.67□□□□□ -0.86
USP16-202ENST00000399973 TBX21Q9UL17 535 aa9.67□□□□□ -0.86
USP16-202ENST00000399973 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
USP16-202ENST00000399973 GRIN2DO15399 1336 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 A6NJR5 290 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 STXBP3O00186 592 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 SOX1O00570 391 aaPredicted RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 MEIS2O14770 477 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 EPB41L2O43491 1005 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 B4GALT4O60513 344 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 KPNA6O60684 536 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 RGS20O76081 388 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 ITGB8P26012 769 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 ADD1P35611 737 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 CDK7P50613 346 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 CCT2P78371 535 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 AKAP17AQ02040 695 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 FUT2Q10981 343 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 STK3Q13188 491 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 POTEHQ6S545 545 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 VSIG10LQ86VR7 867 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 PHKBQ93100 1093 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 LRCH3Q96II8 777 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 SPATA33Q96N06 139 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 TOX2Q96NM4 488 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
USP16-202ENST00000399973 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 TRPV6Q9H1D0 765 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 EHMT1Q9H9B1 1298 aa9.66□□□□□ -0.86
USP16-202ENST00000399973 MLXIPQ9HAP2 919 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms