RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 EMID1Q96A84 441 aaPredicted RBP17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 DDX41Q9UJV9 622 aaKnown RBP17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
SMIM11A-203ENST00000399299 PIK3CDO00329 1044 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 EPB41L2O43491 1005 aaKnown RBP17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 REC8O95072 547 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 CCND2P30279 289 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 HSPA4P34932 840 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 RCAN1P53805 252 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 LY6KQ17RY6 165 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 IL31RAQ8NI17 732 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 MYH7BA7E2Y1 1941 aa17.17■□□□□ 0.34
SMIM11A-203ENST00000399299 B4GALT4O60513 344 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 STAM2O75886 525 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 RGS20O76081 388 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 MMP3P08254 477 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 TGFB3P10600 412 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 EPHB4P54760 987 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 PPIGQ13427 754 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
SMIM11A-203ENST00000399299 MEIS2O14770 477 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 SUPT20HL2P0C7V6 817 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 PTPN11Q06124 597 aaPredicted RBP17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 NFRKBQ6P4R8 1299 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 CUL5Q93034 780 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 TRPV6Q9H1D0 765 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 HIPK3Q9H422 1215 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
SMIM11A-203ENST00000399299 ZBTB43O43298 467 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 HOXD8P13378 290 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 RTN1Q16799 776 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 NBPF20Q3BBV1 942 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 FBXL16Q8N461 479 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 PPTC7Q8NI37 304 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 NOC4LQ9BVI4 516 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 CNTNAP5Q8WYK1 1306 aa17.14■□□□□ 0.33
SMIM11A-203ENST00000399299 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 DGKDQ16760 1214 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 GNPTABQ3T906 1256 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 XRRA1Q6P2D8 792 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 USP17L6PQ6QN14 398 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 DHX37Q8IY37 1157 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
SMIM11A-203ENST00000399299 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 CSF2RAP15509 400 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 UBA1P22314 1058 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 ICAM3P32942 547 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 CYP2C18P33260 490 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 FUT2Q10981 343 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 FAM47CQ5HY64 1035 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 CELF3Q5SZQ8 465 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 PSRC1Q6PGN9 363 aaPredicted RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 SESTD1Q86VW0 696 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 DEFB123Q8N688 67 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 PSTPIP2Q9H939 334 aa17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 TRMT13Q9NUP7 481 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-203ENST00000399299 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 GGPS1O95749 300 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 F2P00734 622 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 FGD1P98174 961 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 SP2Q02086 613 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 C16orf59Q7L2K0 433 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 KAT2BQ92831 832 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 KATNAL1Q9BW62 490 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
SMIM11A-203ENST00000399299 NID2Q14112 1375 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms