RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 KLK7P49862 253 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 PROM2Q8N271 834 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 NOA1Q8NC60 698 aaKnown RBP12.66□□□□□ -0.38
C4orf3-201ENST00000399075 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 COA7Q96BR5 231 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 EDEM3Q9BZQ6 932 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 ABCB6Q9NP58 842 aa12.66□□□□□ -0.38
C4orf3-201ENST00000399075 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 LCA5LO95447 670 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 TFRCP02786 760 aaKnown RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 VSNL1P62760 191 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 MTMR8Q96EF0 704 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 PCMTD1Q96MG8 357 aaPredicted RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 RHOXF2BP0C7M4 288 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 TNNT3P45378 269 aaPredicted RBP12.65□□□□□ -0.38
C4orf3-201ENST00000399075 USP14P54578 494 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 GTF2IP78347 998 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 HYIQ5T013 277 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 CUL5Q93034 780 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 RHOXF2Q9BQY4 288 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
C4orf3-201ENST00000399075 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 SPA17Q15506 151 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
C4orf3-201ENST00000399075 LACRTQ9GZZ8 138 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 PPEF1O14829 653 aaPredicted RBP12.64□□□□□ -0.39
C4orf3-201ENST00000399075 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
C4orf3-201ENST00000399075 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 CCDC42Q96M95 316 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 TSG101Q99816 390 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
C4orf3-201ENST00000399075 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
C4orf3-201ENST00000399075 POTEMA6NI47 508 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 H3BQF6 201 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 SHMT1P34896 483 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 DDR1Q08345 913 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 DDX12PQ92771 950 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ZBTB5O15062 677 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 PPP1R11O60927 126 aaPredicted RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 TNNI2P48788 182 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 PICALMQ13492 652 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 EEF2KMTQ96G04 330 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 NT5C3AQ9H0P0 336 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 EHD4Q9H223 541 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 VIPAS39Q9H9C1 493 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 MYH7BA7E2Y1 1941 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ENC1O14682 589 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 HAS1Q92839 578 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 DNAJC19Q96DA6 116 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 MMS19Q96T76 1030 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
C4orf3-201ENST00000399075 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 ZNF263O14978 683 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 PRLRP16471 622 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 ITIH3Q06033 890 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 CASP8Q14790 479 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 ZNF572Q7Z3I7 529 aaPredicted RBP12.62□□□□□ -0.39
C4orf3-201ENST00000399075 CERS5Q8N5B7 392 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
C4orf3-201ENST00000399075 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms