RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TMC4Q7Z404 712 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 LARP4BQ92615 738 aaKnown RBP28.43■■■□□ 2.14
COL13A1-203ENST00000398969 NRXN2Q9P2S2 1712 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 IL1R1P14778 569 aa28.42■■■□□ 2.14
COL13A1-203ENST00000398969 TNNT3P45378 269 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-203ENST00000398969 CCDC96Q2M329 555 aa28.42■■■□□ 2.14
COL13A1-203ENST00000398969 HPCAL4Q9UM19 191 aa28.42■■■□□ 2.14
COL13A1-203ENST00000398969 C2CD5Q86YS7 1000 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 SP8Q8IXZ3 490 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 TRIM58Q8NG06 486 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 IFIH1Q9BYX4 1025 aaKnown RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 FAM207AQ9NSI2 230 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 ABCB11O95342 1321 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 hCG_1984214I3L0E3 225 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 PPEF1O14829 653 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 SLC37A4O43826 429 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 MAN2A1Q16706 1144 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 DYMQ7RTS9 669 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 GUF1Q8N442 669 aaKnown RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 ZNF713Q8N859 430 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 SMCR8Q8TEV9 937 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 SH2D4AQ9H788 454 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 CWC15Q9P013 229 aaKnown RBP28.41■■■□□ 2.14
COL13A1-203ENST00000398969 JRKLQ9Y4A0 524 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 PCDHA13Q9Y5I0 950 aa28.41■■■□□ 2.14
COL13A1-203ENST00000398969 USO1O60763 962 aaKnown RBP28.4■■■□□ 2.14
COL13A1-203ENST00000398969 PLCG2P16885 1265 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 RHBDL3P58872 404 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 TMEM266Q2M3C6 531 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 LEKR1Q6ZMV7 388 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 CDK5RAP3Q96JB5 506 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 TRERF1Q96PN7 1200 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 SNX12Q9UMY4 172 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 CAPN6Q9Y6Q1 641 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 EDIL3O43854 480 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 ZMYND10O75800 440 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 TDP2O95551 362 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 SYF2O95926 243 aaKnown RBP28.4■■■□□ 2.14
COL13A1-203ENST00000398969 MMP10P09238 476 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 KIF11P52732 1056 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 C2orf54Q08AI8 447 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 IQCEQ6IPM2 695 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 COG1Q8WTW3 980 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 LRRC37AA6NMS7 1700 aa28.4■■■□□ 2.14
COL13A1-203ENST00000398969 FRMPD2Q68DX3 1309 aaPredicted RBP28.39■■■□□ 2.14
COL13A1-203ENST00000398969 ZC3H4Q9UPT8 1303 aaKnown RBP28.39■■■□□ 2.14
COL13A1-203ENST00000398969 LCA5LO95447 670 aa28.39■■■□□ 2.14
COL13A1-203ENST00000398969 PDHBP11177 359 aa28.39■■■□□ 2.14
COL13A1-203ENST00000398969 TACC1O75410 805 aa28.39■■■□□ 2.13
COL13A1-203ENST00000398969 FGFR1OPO95684 399 aaKnown RBP28.39■■■□□ 2.13
COL13A1-203ENST00000398969 EIF4A3P38919 411 aaKnown RBP28.39■■■□□ 2.13
COL13A1-203ENST00000398969 CCDC84Q86UT8 332 aaPredicted RBP28.39■■■□□ 2.13
COL13A1-203ENST00000398969 CREG2Q8IUH2 290 aa28.39■■■□□ 2.13
COL13A1-203ENST00000398969 RAD54LQ92698 747 aa28.39■■■□□ 2.13
COL13A1-203ENST00000398969 FAM204AQ9H8W3 233 aa28.39■■■□□ 2.13
COL13A1-203ENST00000398969 ATP6V0A2Q9Y487 856 aa28.39■■■□□ 2.13
COL13A1-203ENST00000398969 TNS1Q9HBL0 1735 aaKnown RBP28.38■■■□□ 2.13
COL13A1-203ENST00000398969 POTEMA6NI47 508 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 C6orf229H3BNL8 230 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 RNF40O75150 1001 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 ADCY7P51828 1080 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC63Q05C16 580 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 CCNI2Q6ZMN8 369 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-203ENST00000398969 COA7Q96BR5 231 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 MMRN2Q9H8L6 949 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 MLXIPQ9HAP2 919 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 LTBP1Q14766 1721 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 MYBL2P10244 700 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC55Q6ZSA7 311 aa28.38■■■□□ 2.13
COL13A1-203ENST00000398969 NPR1P16066 1061 aa28.37■■■□□ 2.13
COL13A1-203ENST00000398969 PDIA5Q14554 519 aa28.37■■■□□ 2.13
COL13A1-203ENST00000398969 GSPT2Q8IYD1 628 aaKnown RBP28.37■■■□□ 2.13
COL13A1-203ENST00000398969 NUDT12Q9BQG2 462 aa28.37■■■□□ 2.13
COL13A1-203ENST00000398969 RAB34Q9BZG1 259 aa28.37■■■□□ 2.13
COL13A1-203ENST00000398969 RGS17Q9UGC6 210 aaPredicted RBP28.37■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC53A6NM62 1247 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 RPS6KA5O75582 802 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 PRPF6O94906 941 aaKnown RBP28.36■■■□□ 2.13
COL13A1-203ENST00000398969 SNX29Q8TEQ0 813 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 DEF6Q9H4E7 631 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 MOCS3O95396 460 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 EHHADHQ08426 723 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 ZNF572Q7Z3I7 529 aaPredicted RBP28.36■■■□□ 2.13
COL13A1-203ENST00000398969 BAP1Q92560 729 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 FAM163AQ96GL9 167 aaPredicted RBP28.36■■■□□ 2.13
COL13A1-203ENST00000398969 GDAP1L1Q96MZ0 367 aa28.36■■■□□ 2.13
COL13A1-203ENST00000398969 PRLRP16471 622 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 PDE6BP35913 854 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 TMEM119Q4V9L6 283 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 RRAGAQ7L523 313 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 KCNK18Q7Z418 384 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 MMGT1Q8N4V1 131 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 DDX12PQ92771 950 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 SELENOOQ9BVL4 669 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 AKR1B10O60218 316 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 KRT79Q5XKE5 535 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 GAKO14976 1311 aa28.35■■■□□ 2.13
COL13A1-203ENST00000398969 PLIN4Q96Q06 1357 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 IVLP07476 585 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 ITIH3Q06033 890 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms