RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CEP170P1Q96L14 293 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 FAN1Q9Y2M0 1017 aa10.18□□□□□ -0.78
ATL3-201ENST00000398868 WRNIP1Q96S55 665 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 YIPF3Q9GZM5 350 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 HACD3Q9P035 362 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 IBTKQ9P2D0 1353 aaPredicted RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 TROVE2P10155 538 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATL3-201ENST00000398868 TRIP13Q15645 432 aaPredicted RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 RWDD4Q6NW29 188 aaKnown RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 EAF2Q96CJ1 260 aaPredicted RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 MXD3Q9BW11 206 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 STK24Q9Y6E0 443 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 PDHA1P08559 390 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 ECE1P42892 770 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 TAF11Q15544 211 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 MAGEA1P43355 309 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 RPS6KA1Q15418 735 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 PHLDB3Q6NSJ2 640 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 SNX25Q9H3E2 840 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 DKC1O60832 514 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATL3-201ENST00000398868 TUBBP07437 444 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 NLRP12P59046 1061 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 SCYL3Q8IZE3 742 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 C2orf69Q8N8R5 385 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 PIGOQ8TEQ8 1089 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 CYTH2Q99418 400 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 DNAJC17Q9NVM6 304 aaKnown RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 SAR1BQ9Y6B6 198 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 MAP3K15Q6ZN16 1313 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 CYP2D6P10635 497 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 STAT2P52630 851 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 PTGDRQ13258 359 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 MESDQ14696 234 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 RFX6Q8HWS3 928 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 CACYBPQ9HB71 228 aaKnown RBP10.17□□□□□ -0.78
ATL3-201ENST00000398868 LMBRD1Q9NUN5 540 aa10.17□□□□□ -0.78
ATL3-201ENST00000398868 TMEM62Q0P6H9 643 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ADALQ6DHV7 355 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 CIAPIN1Q6FI81 312 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 SCN4BQ8IWT1 228 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ARAP3Q8WWN8 1544 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 HSPD1P10809 573 aaKnown RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 ADCY8P40145 1251 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 FAM71BQ8TC56 605 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 TBX22Q9Y458 520 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 SOS2Q07890 1332 aaPredicted RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 SGK1O00141 431 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 MRPS25P82663 173 aaKnown RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 KCNV2Q8TDN2 545 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 SH2D3AQ9BRG2 576 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 C1orf112Q9NSG2 853 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 HESX1Q9UBX0 185 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 JRKLQ9Y4A0 524 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 GOLGA8KD6RF30 607 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 WDR46O15213 610 aaKnown RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 CXCR5P32302 372 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ELF1P32519 619 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 C1orf228Q6PIY5 440 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 TTLL6Q8N841 843 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 WDR48Q8TAF3 677 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 SH3RF3Q8TEJ3 882 aaPredicted RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 IFIH1Q9BYX4 1025 aaKnown RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 KMT5AQ9NQR1 393 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 POC1B-GALNT4F8VUJ3 575 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 NMT2O60551 498 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ZBTB17Q13105 803 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 HSPH1Q92598 858 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
ATL3-201ENST00000398868 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 VCX3AQ9NNX9 186 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 ARHGEF10O15013 1369 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 KRIT1O00522 736 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 PASD1Q8IV76 773 aa10.16□□□□□ -0.78
ATL3-201ENST00000398868 XDHP47989 1333 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 LUC7L3O95232 432 aaKnown RBP10.15□□□□□ -0.78
ATL3-201ENST00000398868 GH2P01242 217 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 SUPT20HL1Q3ZLR7 823 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 CCDC93Q567U6 631 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 FAM83BQ5T0W9 1011 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 PIGBQ92521 554 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 HVCN1Q96D96 273 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 CSRNP2Q9H175 543 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 HMGXB3Q12766 1538 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 PDE6CP51160 858 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 MMEL1Q495T6 779 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 SUSD4Q5VX71 490 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 TBC1D9BQ66K14 1250 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 WDR91A4D1P6 747 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 IREB2P48200 963 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms