RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
SNRNP25-203ENST00000397876 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 OPLAHO14841 1288 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 CYP21A2P08686 494 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 CHMLP26374 656 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 RABGGTBP53611 331 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 GRM4Q14833 912 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 PTGISQ16647 500 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 DGKDQ16760 1214 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 EMID1Q96A84 441 aaPredicted RBP16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
SNRNP25-203ENST00000397876 SCN5AQ14524 2016 aa16.58■□□□□ 0.25
SNRNP25-203ENST00000397876 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 IQCF3P0C7M6 154 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 PTH1RQ03431 593 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 WTAPQ15007 396 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 NCOA7Q8NI08 942 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 PPM1EQ8WY54 764 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 SYMPKQ92797 1274 aaKnown RBP16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.242e-9■□□□□ 9.5
SNRNP25-203ENST00000397876 CHD9Q3L8U1 2897 aa16.58■□□□□ 0.24
SNRNP25-203ENST00000397876 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 IGFBP4P22692 258 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 DHX37Q8IY37 1157 aaKnown RBP16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 KAT2BQ92831 832 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 PIGSQ96S52 555 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
SNRNP25-203ENST00000397876 E7EWF7 191 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 SGSM2O43147 1006 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 MYOGP15173 224 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 HOXA13P31271 388 aaPredicted RBP16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 TJAP1Q5JTD0 557 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 GDF6Q6KF10 455 aaPredicted RBP16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 KCNV1Q6PIU1 500 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 GTF2IRD1Q9UHL9 959 aa16.56■□□□□ 0.24
SNRNP25-203ENST00000397876 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 F2P00734 622 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 ZNF286BP0CG31 522 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 CCND2P30279 289 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 PSEN2P49810 448 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 MFSD10Q14728 455 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 PGM5Q15124 567 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
SNRNP25-203ENST00000397876 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 RGS20O76081 388 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 PARNO95453 639 aaKnown RBP16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 GGPS1O95749 300 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 CA3P07451 260 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 SELPP16109 830 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 KCNJ6P48051 423 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 RBL2Q08999 1139 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 TROAPQ12815 778 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 SLC35G1Q2M3R5 365 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 LRRC8DQ7L1W4 858 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 PRDM6Q9NQX0 595 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
SNRNP25-203ENST00000397876 VCANP13611 3396 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 KIF28PB7ZC32 967 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 CYTH3O43739 400 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 HOXD8P13378 290 aaPredicted RBP16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 CCDC85BQ15834 202 aaPredicted RBP16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 CELF3Q5SZQ8 465 aaKnown RBP16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 HERC6Q8IVU3 1022 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 DHX38Q92620 1227 aaKnown RBP16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 SPATA33Q96N06 139 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms