RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 BAATQ14032 418 aaPredicted RBP16.9■□□□□ 0.3
CAPN3-207ENST00000397200 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
CAPN3-207ENST00000397200 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 MMP19Q99542 508 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 IVNS1ABPQ9Y6Y0 642 aa16.9■□□□□ 0.3
CAPN3-207ENST00000397200 ZNFX1Q9P2E3 1918 aaKnown RBP16.89■□□□□ 0.3
CAPN3-207ENST00000397200 FCER1AP12319 257 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 ZNF165P49910 485 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
CAPN3-207ENST00000397200 KCTD2Q14681 263 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 IQCB1Q15051 598 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 PIK3AP1Q6ZUJ8 805 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 SYTL5Q8TDW5 730 aaPredicted RBP16.89■□□□□ 0.29
CAPN3-207ENST00000397200 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
CAPN3-207ENST00000397200 ZNF202O95125 648 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 PLEKHH3Q7Z736 793 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 LUZP1Q86V48 1076 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 ANO3Q9BYT9 981 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 EHMT1Q9H9B1 1298 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 ANO10Q9NW15 660 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 MGAMO43451 1857 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 STRNO43815 780 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 PTPREP23469 700 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 EARS2Q5JPH6 523 aaKnown RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 ELOA2Q8IYF1 753 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
CAPN3-207ENST00000397200 FBXO2Q9UK22 296 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-207ENST00000397200 FAM205CA6NFA0 338 aa16.87■□□□□ 0.29
CAPN3-207ENST00000397200 ABRAQ8N0Z2 381 aa16.87■□□□□ 0.29
CAPN3-207ENST00000397200 KRI1Q8N9T8 703 aaKnown RBP16.87■□□□□ 0.29
CAPN3-207ENST00000397200 ZNF579Q8NAF0 562 aaKnown RBP16.87■□□□□ 0.29
CAPN3-207ENST00000397200 COL20A1Q9P218 1284 aa16.87■□□□□ 0.29
CAPN3-207ENST00000397200 MYH7BA7E2Y1 1941 aa16.87■□□□□ 0.29
CAPN3-207ENST00000397200 LCTP09848 1927 aa16.87■□□□□ 0.29
CAPN3-207ENST00000397200 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
CAPN3-207ENST00000397200 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
CAPN3-207ENST00000397200 SYKP43405 635 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 SP3Q02447 781 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 INF2Q27J81 1249 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 SARM1Q6SZW1 724 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 DNAJC5GQ8N7S2 189 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 TBCKQ8TEA7 893 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 CEP131Q9UPN4 1083 aa16.86■□□□□ 0.29
CAPN3-207ENST00000397200 PLXNA1Q9UIW2 1896 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 TAAR1Q96RJ0 339 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 SDF4Q9BRK5 362 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 ZNF236Q9UL36 1845 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 PGK2P07205 417 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 ADORA2AP29274 412 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 SREBF1P36956 1147 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 FCGRTP55899 365 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 CNTN2Q02246 1040 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 GRB14Q14449 540 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 KIF22Q14807 665 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 NEK8Q86SG6 692 aa16.85■□□□□ 0.29
CAPN3-207ENST00000397200 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 PURBQ96QR8 312 aaKnown RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
CAPN3-207ENST00000397200 DNAJC25-GNG10A0A024R161 153 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 GPR25O00155 361 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 BMP15O95972 392 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 EIF2AK2P19525 551 aaKnown RBP16.84■□□□□ 0.29
CAPN3-207ENST00000397200 ATP2B1P20020 1258 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 UBXN2AP68543 259 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 ARHGAP4P98171 946 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
CAPN3-207ENST00000397200 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 DNERQ8NFT8 737 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 CLIC6Q96NY7 704 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
CAPN3-207ENST00000397200 RPTORQ8N122 1335 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
CAPN3-207ENST00000397200 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.29
CAPN3-207ENST00000397200 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms