RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 NKX3-2P78367 333 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 MRPS9P82933 396 aaKnown RBP11.13□□□□□ -0.63
MCF2L-206ENST00000397021 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-206ENST00000397021 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
MCF2L-206ENST00000397021 DDX41Q9UJV9 622 aaKnown RBP11.13□□□□□ -0.63
MCF2L-206ENST00000397021 LCTP09848 1927 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 TRIM43BA6NCK2 446 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 ADAMTS3O15072 1205 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 ZEB2O60315 1214 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 MAGEA10P43363 369 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-206ENST00000397021 EVCP57679 992 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 ANAPC15P60006 121 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 ARHGAP1Q07960 439 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 NTRK3Q16288 839 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PKN1Q16512 942 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-206ENST00000397021 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-206ENST00000397021 BCAS3Q9H6U6 928 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 TPCN1Q9ULQ1 816 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PCDHA6Q9UN73 950 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 PCDHA8Q9Y5H6 950 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
MCF2L-206ENST00000397021 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 ELP1O95163 1332 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-206ENST00000397021 NKRFO15226 690 aaKnown RBP eCLIP11.11□□□□□ -0.63
MCF2L-206ENST00000397021 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
MCF2L-206ENST00000397021 GH1P01241 217 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 SCG2P13521 617 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 CPT1AP50416 773 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 ADCY7P51828 1080 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 AK2P54819 239 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 AKAP17AQ02040 695 aaKnown RBP11.11□□□□□ -0.63
MCF2L-206ENST00000397021 SP2Q02086 613 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 ZNF274Q96GC6 653 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-206ENST00000397021 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 PRKAG2Q9UGJ0 569 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 NID2Q14112 1375 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
MCF2L-206ENST00000397021 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 A6NJR5 290 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 ARVCFO00192 962 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 CPLX1O14810 134 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 GGPS1O95749 300 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 MMP3P08254 477 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 CLTBP09497 229 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 IFNAR1P17181 557 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
MCF2L-206ENST00000397021 ITGB8P26012 769 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 CDK7P50613 346 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 NEK4P51957 841 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
MCF2L-206ENST00000397021 FAAP100Q0VG06 881 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 SCRN1Q12765 414 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
MCF2L-206ENST00000397021 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
MCF2L-206ENST00000397021 NECAB1Q8N987 351 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 BADQ92934 168 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 MTG1Q9BT17 334 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-206ENST00000397021 TMEM39AQ9NV64 488 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 PKD2L1Q9P0L9 805 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 TELO2Q9Y4R8 837 aa11.1□□□□□ -0.63
MCF2L-206ENST00000397021 DCDC2CA8MYV0 355 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 SPATA31C2B4DYI2 1134 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 CABYRO75952 493 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 LARGE1O95461 756 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 SP4Q02446 784 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 SSRP1Q08945 709 aaKnown RBP11.09□□□□□ -0.63
MCF2L-206ENST00000397021 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-206ENST00000397021 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 CELF3Q5SZQ8 465 aaKnown RBP11.09□□□□□ -0.63
MCF2L-206ENST00000397021 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 ANKRD33Q7Z3H0 272 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 FAM126BQ8IXS8 530 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 RASGRP4Q8TDF6 673 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 INPP4AQ96PE3 977 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-206ENST00000397021 GDF15Q99988 308 aa11.09□□□□□ -0.63
MCF2L-206ENST00000397021 LBHD1Q9BQE6 289 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-206ENST00000397021 RNF26Q9BY78 433 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms