RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CCDC47Q96A33 483 aaKnown RBP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 OSBPL9Q96SU4 736 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 IFIH1Q9BYX4 1025 aaKnown RBP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 CRNKL1Q9BZJ0 848 aaKnown RBP14.79□□□□□ -0.04
TRIM40-207ENST00000396581 CD209Q9NNX6 404 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 HYOU1Q9Y4L1 999 aa14.79□□□□□ -0.04
TRIM40-207ENST00000396581 OPA1O60313 960 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 BAG6P46379 1132 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 SLC35G1Q2M3R5 365 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 GLE1Q53GS7 698 aaKnown RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 KRT26Q7Z3Y9 468 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 CABP7Q86V35 215 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 CAPS2Q9BXY5 557 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 IL17RBQ9NRM6 502 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 BARHL2Q9NY43 387 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 MAD2L2Q9UI95 211 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 MYH1P12882 1939 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 LRRC37AA6NMS7 1700 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 STXBP3O00186 592 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 PLEKP08567 350 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 KIF11P52732 1056 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 INF2Q27J81 1249 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 ASTE1Q2TB18 679 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 STAG2Q8N3U4 1231 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 RASSF8Q8NHQ8 419 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 GPR101Q96P66 508 aaPredicted RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 YY1AP1Q9H869 796 aa14.78□□□□□ -0.04
TRIM40-207ENST00000396581 ATXN2Q99700 1313 aaKnown RBP14.78□□□□□ -0.04
TRIM40-207ENST00000396581 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.04
TRIM40-207ENST00000396581 HOXA7P31268 230 aaPredicted RBP14.77□□□□□ -0.04
TRIM40-207ENST00000396581 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.04
TRIM40-207ENST00000396581 CCDC96Q2M329 555 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 VWA3BQ502W6 1294 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 EMC10Q5UCC4 262 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 CNNM4Q6P4Q7 775 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 FOXR2Q6PJQ5 311 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 PNMA1Q8ND90 353 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 SMCR8Q8TEV9 937 aaPredicted RBP14.77□□□□□ -0.04
TRIM40-207ENST00000396581 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.04
TRIM40-207ENST00000396581 SEMA6BQ9H3T3 888 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 STIM2Q9P246 746 aa14.77□□□□□ -0.04
TRIM40-207ENST00000396581 LTBP1Q14766 1721 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 EBAG9O00559 213 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 CYTH3O43739 400 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 OR52Z1P0C646 297 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 CYP2D6P10635 497 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 FCER1AP12319 257 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 AMPD3Q01432 767 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 ALS2CR12Q96Q35 445 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 EDEM3Q9BZQ6 932 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 ZMYND12Q9H0C1 365 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 MLXIPQ9HAP2 919 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 RNF14Q9UBS8 474 aa14.77□□□□□ -0.05
TRIM40-207ENST00000396581 ROBO3Q96MS0 1386 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 SSU72P8A0A1W2PR75 194 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 ANKRD65E5RJM6 399 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 RBAK-RBAKDNI3L0D1 243 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 EPHB6O15197 1021 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 MOCS3O95396 460 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 ORC2Q13416 577 aaPredicted RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 CCDC84Q86UT8 332 aaPredicted RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 RNF10Q8N5U6 811 aaKnown RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 TSEN2Q8NCE0 465 aaKnown RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 BAP1Q92560 729 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 PLIN2Q99541 437 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 MMTAG2Q9BU76 263 aaKnown RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 NDST4Q9H3R1 872 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 JAG2Q9Y219 1238 aa14.76□□□□□ -0.05
TRIM40-207ENST00000396581 BAZ2BQ9UIF8 2168 aaKnown RBP14.76□□□□□ -0.05
TRIM40-207ENST00000396581 C6orf229H3BNL8 230 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 ZEB2O60315 1214 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 LDHBP07195 334 aaKnown RBP14.75□□□□□ -0.05
TRIM40-207ENST00000396581 EIF4A3P38919 411 aaKnown RBP14.75□□□□□ -0.05
TRIM40-207ENST00000396581 CCT5P48643 541 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 ASIC1P78348 528 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 MAN2A1Q16706 1144 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 TTMPQ5BVD1 217 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 NFRKBQ6P4R8 1299 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 DEFB132Q7Z7B7 95 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 C2CD5Q86YS7 1000 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 BCAS4Q8TDM0 211 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 PCMTD1Q96MG8 357 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-207ENST00000396581 TLR10Q9BXR5 811 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 TSKSQ9UJT2 592 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 QSER1Q2KHR3 1735 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
TRIM40-207ENST00000396581 GUCY2CP25092 1073 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 APBA1Q02410 837 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 STYK1Q6J9G0 422 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 KRT25Q7Z3Z0 450 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 C1orf131Q8NDD1 294 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms