RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ABCC12Q96J65 1359 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 RIC1Q4ADV7 1423 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 GOLGA6L10A6NI86 522 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 LRRC53A6NM62 1247 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 SCG2P13521 617 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 SLC1A4P43007 532 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 NPY5RQ15761 445 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 EMBQ6PCB8 327 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 N4BP2L2Q92802 583 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-203ENST00000396547 P2RX5Q93086 422 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 CPVLQ9H3G5 476 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 GOLPH3Q9H4A6 298 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 THAP9Q9H5L6 903 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 SH2D4AQ9H788 454 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 KLC4Q9NSK0 619 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 RPS6KA4O75676 772 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 TCP1P17987 556 aaKnown RBP10.88□□□□□ -0.67
TRIM39-203ENST00000396547 ARID4AP29374 1257 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-203ENST00000396547 NF2P35240 595 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 LRRC41Q15345 812 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 MEA1Q16626 185 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 NAALADL2Q58DX5 795 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 VGLL2Q8N8G2 317 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 CCDC47Q96A33 483 aaKnown RBP10.88□□□□□ -0.67
TRIM39-203ENST00000396547 NUP58Q9BVL2 599 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 TSGA10Q9BZW7 698 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 EPN3Q9H201 632 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 PLAAQ9Y263 795 aa10.88□□□□□ -0.67
TRIM39-203ENST00000396547 GOLGB1Q14789 3259 aaKnown RBP10.87□□□□□ -0.67
TRIM39-203ENST00000396547 PPP1R37O75864 691 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 GYG1P46976 350 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 FUT2Q10981 343 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 HEATR3Q7Z4Q2 680 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 CCDC13Q8IYE1 715 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 ZKSCAN4Q969J2 545 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-203ENST00000396547 FAM205AQ6ZU69 1335 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 PLCG1P19174 1290 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 FNTAP49354 379 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 MMP14P50281 582 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 TROAPQ12815 778 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
TRIM39-203ENST00000396547 PTGISQ16647 500 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 TMTC3Q6ZXV5 915 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 TLR10Q9BXR5 811 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 CEP83Q9Y592 693 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 PALMO75781 387 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 CYP2D6P10635 497 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 GNAT2P19087 354 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 PDE6BP35913 854 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-203ENST00000396547 LETM2Q2VYF4 491 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 TMED8Q6PL24 325 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-203ENST00000396547 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 TBC1D31Q96DN5 1066 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 HAUS2Q9NVX0 235 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
TRIM39-203ENST00000396547 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 KLRC4O43908 158 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 LONP1P36776 959 aaKnown RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 TECP42680 631 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 PAK2Q13177 524 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 INTS5Q6P9B9 1019 aaKnown RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 GIGYF2Q6Y7W6 1299 aaKnown RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 LRRC15Q8TF66 581 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 UBLCP1Q8WVY7 318 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 TNFRSF25Q93038 417 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 TRIM31Q9BZY9 425 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 SLC40A1Q9NP59 571 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 CCNE1P24864 410 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 MDH1P40925 334 aaKnown RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 PSEN1P49768 467 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 CABP7Q86V35 215 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 AP1M1Q9BXS5 423 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 TTYH3Q9C0H2 523 aa10.86□□□□□ -0.67
TRIM39-203ENST00000396547 MYO5AQ9Y4I1 1855 aaKnown RBP10.86□□□□□ -0.67
TRIM39-203ENST00000396547 SMIM23A6NLE4 172 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 CHUKO15111 745 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 PPP1R12BO60237 982 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-203ENST00000396547 PDE8AO60658 829 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 SKOR1P84550 965 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 MIIPQ5JXC2 388 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 STAG2Q8N3U4 1231 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 GIMAP8Q8ND71 665 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-203ENST00000396547 NDST4Q9H3R1 872 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 SPON1Q9HCB6 807 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 RBM28Q9NW13 759 aaKnown RBP10.85□□□□□ -0.67
TRIM39-203ENST00000396547 TBC1D7Q9P0N9 293 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 STARD3NLO95772 234 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms