RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NMIQ13287 307 aaPredicted RBP20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 GRB10Q13322 594 aa20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 AAMPQ13685 434 aa20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 CDC37Q16543 378 aaPredicted RBP20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 KCNV1Q6PIU1 500 aa20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
EXOSC3-202ENST00000396521 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 PPFIA4O75335 1185 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 PTK7Q13308 1070 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 IKBKEQ14164 716 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 LY6KQ17RY6 165 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 ARHGEF16Q5VV41 709 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 SAMD3Q8N6K7 520 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 PPTC7Q8NI37 304 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 KAT2BQ92831 832 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 NECAB3Q96P71 396 aaPredicted RBP20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 TAAR1Q96RJ0 339 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 UBA5Q9GZZ9 404 aa20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 DDX41Q9UJV9 622 aaKnown RBP20.44■□□□□ 0.86
EXOSC3-202ENST00000396521 GBF1Q92538 1859 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 EPOPA6NHQ4 379 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 GJB5O95377 273 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 CKBP12277 381 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 TRAF1Q13077 416 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 FBXO11Q86XK2 927 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 EMSYQ7Z589 1322 aa20.43■□□□□ 0.86
EXOSC3-202ENST00000396521 LPXNO60711 386 aa20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 F2P00734 622 aa20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 PARP1P09874 1014 aaKnown RBP20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 TGS1Q96RS0 853 aaKnown RBP20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 ZSCAN10Q96SZ4 725 aaPredicted RBP20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 MRVI1Q9Y6F6 885 aa20.42■□□□□ 0.86
EXOSC3-202ENST00000396521 HIP1O00291 1037 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 NR3C2P08235 984 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 TGFB3P10600 412 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 HOXD8P13378 290 aaPredicted RBP20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 PSEN2P49810 448 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 ERVK-21P61565 698 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 GHRHRQ02643 423 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 GPNMBQ14956 572 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 CHST3Q7LGC8 479 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 DHX37Q8IY37 1157 aaKnown RBP20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 HDAC6Q9UBN7 1215 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 CTNNA3Q9UI47 895 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 HCN4Q9Y3Q4 1203 aa20.41■□□□□ 0.86
EXOSC3-202ENST00000396521 HAS3O00219 553 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 DHX16O60231 1041 aaKnown RBP20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 KDM4AO75164 1064 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 SDSP20132 328 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 MFSD10Q14728 455 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 QRICH1Q2TAL8 776 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 PPP1R13LQ8WUF5 828 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 TBC1D5Q92609 795 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 DHX38Q92620 1227 aaKnown RBP20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 RILPL2Q969X0 211 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 CRBNQ96SW2 442 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 ZKSCAN3Q9BRR0 538 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 AMNQ9BXJ7 453 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 KRT23Q9C075 422 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 CNNM2Q9H8M5 875 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 PXMP2Q9NR77 195 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 COL20A1Q9P218 1284 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 INSL6Q9Y581 213 aa20.4■□□□□ 0.86
EXOSC3-202ENST00000396521 NEDD4P46934 1319 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 NBNO60934 754 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 ARHGEF15O94989 841 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 HSD17B4P51659 736 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 RRP1P56182 461 aaKnown RBP20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 KIAA0753Q2KHM9 967 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 TMEM31Q5JXX7 168 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 KRT40Q6A162 431 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 JMJD4Q9H9V9 463 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 REV3LO60673 3130 aa20.39■□□□□ 0.85
EXOSC3-202ENST00000396521 CFBP00751 764 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 IMMTQ16891 758 aaKnown RBP20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 STOX1Q6ZVD7 989 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 ENAHQ8N8S7 591 aaPredicted RBP20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 DSCC1Q9BVC3 393 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 CPVLQ9H3G5 476 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 ZSWIM5Q9P217 1185 aa20.38■□□□□ 0.85
EXOSC3-202ENST00000396521 SCN5AQ14524 2016 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 LCHNA4D1U4 455 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 GPR37L1O60883 481 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 LGR5O75473 907 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 DEFB103AP81534 67 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 MYSM1Q5VVJ2 828 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 SAMD11Q96NU1 681 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 ALG1Q9BT22 464 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 LRFN3Q9BTN0 628 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 DIAPH3Q9NSV4 1193 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms