RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 RAG1P15918 1043 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 PTPN11Q06124 597 aaPredicted RBP22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 ITGA7Q13683 1181 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 CCDC62Q6P9F0 684 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 SEPT14Q6ZU15 432 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 Q6ZUG5 572 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 TDHQ8IZJ6 230 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 SLC43A3Q8NBI5 491 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 GIMAP8Q8ND71 665 aaPredicted RBP22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 KATNAL1Q9BW62 490 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 PDLIM7Q9NR12 457 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 FRMPD4Q14CM0 1322 aa22.23■■□□□ 1.15
CDKN1B-202ENST00000396340 MYADML2A6NDP7 307 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 FOSP01100 380 aaPredicted RBP22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 HOXA13P31271 388 aaPredicted RBP22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 BEX3Q00994 111 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 AKAP17AQ02040 695 aaKnown RBP22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 DGKDQ16760 1214 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 SLC35G1Q2M3R5 365 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 FCHSD1Q86WN1 690 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 NAP1L2Q9ULW6 460 aaPredicted RBP22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 NID2Q14112 1375 aa22.22■■□□□ 1.15
CDKN1B-202ENST00000396340 TRIOBPQ9H2D6 2365 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 MAFGO15525 162 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 MYCLP12524 364 aaPredicted RBP22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 RXRAP19793 462 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 EVCP57679 992 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 PURAQ00577 322 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 PCNX4Q63HM2 1172 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 GPR153Q6NV75 609 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 NFRKBQ6P4R8 1299 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 CPLX2Q6PUV4 134 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 CXCL17Q6UXB2 119 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 NLRX1Q86UT6 975 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 BRF1Q92994 677 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 DDX41Q9UJV9 622 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
CDKN1B-202ENST00000396340 SCN10AQ9Y5Y9 1956 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 NEDD9Q14511 834 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 LRIT3Q3SXY7 679 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 HEATR3Q7Z4Q2 680 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 DHX37Q8IY37 1157 aaKnown RBP22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 FAM177A1Q8N128 213 aaPredicted RBP22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 CCDC82Q8N4S0 544 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 PPTC7Q8NI37 304 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 PIBF1Q8WXW3 757 aa22.2■■□□□ 1.14
CDKN1B-202ENST00000396340 MEIS2O14770 477 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 FIBPO43427 364 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 PPFIA4O75335 1185 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 NAPAP54920 295 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 FAAP100Q0VG06 881 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 ANKRD1Q15327 319 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 FAM126BQ8IXS8 530 aa22.19■■□□□ 1.14
CDKN1B-202ENST00000396340 CNTNAP5Q8WYK1 1306 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 TIMP1P01033 207 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 ICAM3P32942 547 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 TMEM199Q8N511 208 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 ZNF274Q96GC6 653 aaPredicted RBP22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 TCEANC2Q96MN5 208 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 INPP4AQ96PE3 977 aaPredicted RBP22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 SENP7Q9BQF6 1050 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 BARHL2Q9NY43 387 aa22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 V9GY48 417 aaPredicted RBP22.18■■□□□ 1.14
CDKN1B-202ENST00000396340 MYL3P08590 195 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 GNA11P29992 359 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 MDM2Q00987 491 aaPredicted RBP22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 AP3B2Q13367 1082 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 LY6KQ17RY6 165 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 TRIM22Q8IYM9 498 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 CMTR1Q8N1G2 835 aaKnown RBP22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 BICD2Q8TD16 824 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 RNF26Q9BY78 433 aaPredicted RBP22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 MLXIPQ9HAP2 919 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 RIC8AQ9NPQ8 531 aa22.17■■□□□ 1.14
CDKN1B-202ENST00000396340 CD4P01730 458 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 MMP3P08254 477 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 FPGSQ05932 587 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 ARHGAP1Q07960 439 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 APOBRQ0VD83 1088 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 PFKFB3Q16875 520 aaPredicted RBP22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 MFSD5Q6N075 450 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 GPRASP2Q96D09 838 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 TBX21Q9UL17 535 aa22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
CDKN1B-202ENST00000396340 ESYT2A0FGR8 921 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 TRIM43BA6NCK2 446 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 CPLX1O14810 134 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 PRPF3O43395 683 aaKnown RBP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 SCG2P13521 617 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 FXR1P51114 621 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 ADCY7P51828 1080 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 FUT2Q10981 343 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 PPIGQ13427 754 aaKnown RBP eCLIP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 CELF3Q5SZQ8 465 aaKnown RBP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 MYSM1Q5VVJ2 828 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 USP17L6PQ6QN14 398 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 CCDC155Q8N6L0 562 aa22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 IL27Q8NEV9 243 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms