RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 MAPK8IP1Q9UQF2 711 aa7.4□□□□□ -1.22
AP3S1-202ENST00000395548 COL15A1P39059 1388 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 H7C1D1 291 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 HSP90AB1P08238 724 aaKnown RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 PHKG2P15735 406 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 ERCC3P19447 782 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 ST13P50502 369 aaKnown RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 ANGEL2Q5VTE6 544 aaKnown RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 MAFAQ8NHW3 353 aaPredicted RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 DCPSQ96C86 337 aaKnown RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 COG3Q96JB2 828 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 NOC4LQ9BVI4 516 aaKnown RBP7.39□□□□□ -1.23
AP3S1-202ENST00000395548 BCL2L13Q9BXK5 485 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 PCDHB5Q9Y5E4 795 aa7.39□□□□□ -1.23
AP3S1-202ENST00000395548 RGPD2P0DJD1 1756 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 SBNO2Q9Y2G9 1366 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
AP3S1-202ENST00000395548 SEPT6Q14141 434 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 SLBPQ14493 270 aaKnown RBP eCLIP7.38□□□□□ -1.23
AP3S1-202ENST00000395548 MEI1Q5TIA1 1274 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 FBRSQ9HAH7 460 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 TPX2Q9ULW0 747 aaKnown RBP7.38□□□□□ -1.23
AP3S1-202ENST00000395548 ARFGEF2Q9Y6D5 1785 aa7.38□□□□□ -1.23
AP3S1-202ENST00000395548 EDC4Q6P2E9 1401 aaKnown RBP7.37□□□□□ -1.23
AP3S1-202ENST00000395548 A0A087WZG4 1122 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 GFRA2O00451 464 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 SLITRK5O94991 958 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 GRK4P32298 578 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 CD96P40200 585 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 CLCN7P51798 805 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
AP3S1-202ENST00000395548 SPACA3Q8IXA5 215 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 MIPEPQ99797 713 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 VPS33BQ9H267 617 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 RC3H2Q9HBD1 1191 aaKnown RBP7.37□□□□□ -1.23
AP3S1-202ENST00000395548 COL11A2P13942 1736 aaPredicted RBP7.37□□□□□ -1.23
AP3S1-202ENST00000395548 MON2Q7Z3U7 1717 aa7.37□□□□□ -1.23
AP3S1-202ENST00000395548 MRC1P22897 1456 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 ANKRD31Q8N7Z5 1873 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 TONSLQ96HA7 1378 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 CST3P01034 146 aaPredicted RBP7.36□□□□□ -1.23
AP3S1-202ENST00000395548 RNASE1P07998 156 aaKnown RBP7.36□□□□□ -1.23
AP3S1-202ENST00000395548 CDK8P49336 464 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 INHBEP58166 350 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 PDE4BQ07343 736 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 TNIP1Q15025 636 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 NKG7Q16617 165 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 SFRP5Q5T4F7 317 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 TBC1D9BQ66K14 1250 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 ATG4DQ86TL0 474 aaPredicted RBP7.36□□□□□ -1.23
AP3S1-202ENST00000395548 TDHQ8IZJ6 230 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 GUCD1Q96NT3 240 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 GDF15Q99988 308 aa7.36□□□□□ -1.23
AP3S1-202ENST00000395548 MBNL3Q9NUK0 354 aaKnown RBP7.36□□□□□ -1.23
AP3S1-202ENST00000395548 CNOT7Q9UIV1 285 aaKnown RBP7.36□□□□□ -1.23
AP3S1-202ENST00000395548 A0A1W2PP64 1363 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 NPC1L1Q9UHC9 1359 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 SORBS3O60504 671 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 TFE3P19532 575 aaPredicted RBP7.35□□□□□ -1.23
AP3S1-202ENST00000395548 CYP7A1P22680 504 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 CXCL9Q07325 125 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 IKZF1Q13422 519 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 LETMD1Q6P1Q0 360 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 OLFM4Q6UX06 510 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 FAM177A1Q8N128 213 aaPredicted RBP7.35□□□□□ -1.23
AP3S1-202ENST00000395548 CD99L2Q8TCZ2 262 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 COX4I2Q96KJ9 171 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 R3HDMLQ9H3Y0 253 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 TERF2IPQ9NYB0 399 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 ZNRF3Q9ULT6 936 aa7.35□□□□□ -1.23
AP3S1-202ENST00000395548 PPIP5K2O43314 1243 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 PAPLNO95428 1278 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 PGRP06401 933 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 RPL6Q02878 288 aaKnown RBP7.34□□□□□ -1.23
AP3S1-202ENST00000395548 PRAMEF13Q5VWM6 474 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 DLK2Q6UY11 383 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.23
AP3S1-202ENST00000395548 JARID2Q92833 1246 aaPredicted RBP7.34□□□□□ -1.23
AP3S1-202ENST00000395548 CRELD1Q96HD1 420 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 CACNA1SQ13698 1873 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 ZNF609O15014 1411 aa7.34□□□□□ -1.23
AP3S1-202ENST00000395548 KLRG2A4D1S0 409 aaPredicted RBP7.33□□□□□ -1.24
AP3S1-202ENST00000395548 ADM5C9JUS6 153 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 CTSHP09668 335 aa7.33□□□□□ -1.24
AP3S1-202ENST00000395548 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
AP3S1-202ENST00000395548 CYP19A1P11511 503 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms