RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
HLA-DQA1-203ENST00000395363 TRANK1O15050 2925 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NR3C2P08235 984 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MMP3P08254 477 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ZNF286BP0CG31 522 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NT5C2P49902 561 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MICU3Q86XE3 530 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NSUN6Q8TEA1 469 aaKnown RBP13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 PDCD2LQ9BRP1 358 aa13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 ALDH8A1Q9H2A2 487 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQA1-203ENST00000395363 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CDC45O75419 566 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MCM5P33992 734 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 SP2Q02086 613 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TTLL4Q14679 1199 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PGM5Q15124 567 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 VWCEQ96DN2 955 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TTYH1Q9H313 450 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 HIPK3Q9H422 1215 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MICAL3Q7RTP6 2002 aa13.45□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TLR3O15455 904 aaKnown RBP13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 ZEB2O60315 1214 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 DDAH1O94760 285 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PBX2P40425 430 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CPT1AP50416 773 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 STXBP2Q15833 593 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 UBE2SQ16763 222 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TMEM240Q5SV17 173 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 ZNF365Q70YC5 407 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 KAT2BQ92831 832 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 Q9Y3F1 56 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
HLA-DQA1-203ENST00000395363 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 A6NJR5 290 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CABYRO75952 493 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 GH1P01241 217 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 POLR2MP0CAP2 368 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 VCANP13611 3396 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PWP2Q15269 919 aaKnown RBP13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 EVPLQ92817 2033 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CTAGE1Q96RT6 745 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 RTEL1Q9NZ71 1219 aa13.43□□□□□ -0.26
HLA-DQA1-203ENST00000395363 CNTNAP5Q8WYK1 1306 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 UBA1P22314 1058 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 GHRHRQ02643 423 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 SEMA3FQ13275 785 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 HIC1Q14526 733 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 APOA5Q6Q788 366 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 DEFB128Q7Z7B8 93 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MPHOSPH6Q99547 160 aaKnown RBP13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 ALG1Q9BT22 464 aa13.42□□□□□ -0.26
HLA-DQA1-203ENST00000395363 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MEIS2O14770 477 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 NKRFO15226 690 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 GGPS1O95749 300 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 EXOSC10Q01780 885 aaKnown RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 SP4Q02446 784 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 GDF6Q6KF10 455 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 TYW1BQ6NUM6 668 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 OTOP2Q7RTS6 562 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 MYLIPQ8WY64 445 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 WNT8BQ93098 351 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 PKD2L1Q9P0L9 805 aa13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQA1-203ENST00000395363 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms