RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CCDC47Q96A33 483 aaKnown RBP15.59■□□□□ 0.09
SNCA-204ENST00000394989 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
SNCA-204ENST00000394989 PVALEFA0A1B0GWK0 134 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 SPDYE2BA6NHP3 402 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 OPLAHO14841 1288 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 SPDYE6P0CI01 402 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 TRIM14Q14142 442 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 CENPPQ6IPU0 288 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 KRT222Q8N1A0 295 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 GLIS3Q8NEA6 775 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 NOC3LQ8WTT2 800 aaKnown RBP15.58■□□□□ 0.08
SNCA-204ENST00000394989 DDX12PQ92771 950 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 CNOT6LQ96LI5 555 aaKnown RBP15.58■□□□□ 0.08
SNCA-204ENST00000394989 SMCHD1A6NHR9 2005 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 CYP3A7-CYP3A51PA0A087WV96 503 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 BICDL2A1A5D9 508 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 TCP10L2B9ZVM9 353 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 CYP3A7P24462 503 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 KRT9P35527 623 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 USH1GQ495M9 461 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 MIIPQ5JXC2 388 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 MBOAT7Q96N66 472 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 LZTFL1Q9NQ48 299 aa15.58■□□□□ 0.08
SNCA-204ENST00000394989 CLRN2A0PK11 232 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 RASSF10A6NK89 507 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 POLR3GO15318 223 aaPredicted RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 RAD17O75943 681 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 ECE1P42892 770 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 USP11P51784 963 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 KIAA1755Q5JYT7 1200 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 RBM26Q5T8P6 1007 aaKnown RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 SPICE1Q8N0Z3 855 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 ACRBPQ8NEB7 543 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 GMLQ99445 158 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 GLT8D2Q9H1C3 349 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 PSMD14O00487 310 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 URI1O94763 535 aaPredicted RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 ABL1P00519 1130 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 TPM1P09493 284 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 KCNA3P22001 575 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 HYIQ5T013 277 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 POTEAQ6S8J7 498 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 DNAJC19Q96DA6 116 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 KLK7P49862 253 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 SYDE2Q5VT97 1194 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 CHP1Q99653 195 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 TTYH3Q9C0H2 523 aa15.57■□□□□ 0.08
SNCA-204ENST00000394989 MAGEC2Q9UBF1 373 aaPredicted RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
SNCA-204ENST00000394989 CNTNAP1P78357 1384 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 PES1O00541 588 aaKnown RBP15.56■□□□□ 0.08
SNCA-204ENST00000394989 BMP3P12645 472 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 PPP1R2P41236 205 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 DNM2P50570 870 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 SPIRE1Q08AE8 756 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 BTNL9Q6UXG8 535 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 FBXO11Q86XK2 927 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 TTLL6Q8N841 843 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 LENG9Q96B70 501 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 DNAJC7Q99615 494 aa15.56■□□□□ 0.08
SNCA-204ENST00000394989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNCA-204ENST00000394989 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
SNCA-204ENST00000394989 VIL1P09327 827 aaKnown RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 CASQ1P31415 396 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 STAT3P40763 770 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 ARHGAP4P98171 946 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 CYP26C1Q6V0L0 522 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 ETNPPLQ8TBG4 499 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 HERC5Q9UII4 1024 aaKnown RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 CAPN11Q9UMQ6 739 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 E9PMD0 336 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 MARCH6O60337 910 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 IDEP14735 1019 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 MMP14P50281 582 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 WDR59Q6PJI9 974 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 GUF1Q8N442 669 aaKnown RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 ACER1Q8TDN7 264 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 PSMD1Q99460 953 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 ZNF70Q9UC06 446 aaPredicted RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 POTEB3A0JP26 581 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 POTECB2RU33 542 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 FAM86B1E9PN63 330 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 FAM86B2P0C5J1 330 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 IKQ13123 557 aaPredicted RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 POTEBQ6S5H4 581 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 NAP1L4Q99733 375 aaKnown RBP15.55■□□□□ 0.08
SNCA-204ENST00000394989 FGFBP2Q9BYJ0 223 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 AGPAT5Q9NUQ2 364 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 PRR12Q9ULL5 1215 aa15.55■□□□□ 0.08
SNCA-204ENST00000394989 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms