RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 AFG1LQ8WV93 481 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 PIBF1Q8WXW3 757 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
ATG4A-205ENST00000394892 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-205ENST00000394892 CXXC1Q9P0U4 656 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-205ENST00000394892 DDX41Q9UJV9 622 aaKnown RBP10.29□□□□□ -0.76
ATG4A-205ENST00000394892 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 NKRFO15226 690 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATG4A-205ENST00000394892 CCL23P55773 120 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 MRPS9P82933 396 aaKnown RBP10.28□□□□□ -0.76
ATG4A-205ENST00000394892 EXOSC10Q01780 885 aaKnown RBP10.28□□□□□ -0.76
ATG4A-205ENST00000394892 FUT2Q10981 343 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 SEMA3FQ13275 785 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 PPIGQ13427 754 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATG4A-205ENST00000394892 HIC1Q14526 733 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 TTLL4Q14679 1199 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 GPNMBQ14956 572 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 PGM5Q15124 567 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 MCF2L2Q86YR7 1114 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 TMEM199Q8N511 208 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 TCEANC2Q96MN5 208 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 IWS1Q96ST2 819 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 MAP3K14Q99558 947 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 MTG1Q9BT17 334 aaPredicted RBP10.28□□□□□ -0.76
ATG4A-205ENST00000394892 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 ANO2Q9NQ90 1003 aa10.28□□□□□ -0.76
ATG4A-205ENST00000394892 hCG_1642624A0A1W2PR95 340 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 TNFRSF10AO00220 468 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 ZEB2O60315 1214 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 EIF3JO75822 258 aaKnown RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 DDAH1O94760 285 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 MMP3P08254 477 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 PBX2P40425 430 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 LIFRP42702 1097 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 STXBP2Q15833 593 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 ARHGEF16Q5VV41 709 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 DHX38Q92620 1227 aaKnown RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 KCNB2Q92953 911 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 SCLYQ96I15 445 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 MTIF3Q9H2K0 278 aaKnown RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 HIPK3Q9H422 1215 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
ATG4A-205ENST00000394892 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
ATG4A-205ENST00000394892 ERICH2A1L162 156 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 GCOM1H8Y6P7 765 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 MEIS2O14770 477 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 SORBS3O60504 671 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 GH1P01241 217 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 MYCLP12524 364 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 CPA1P15085 419 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 MCM5P33992 734 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 CPT1AP50416 773 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 PSRC1Q6PGN9 363 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 WNT8BQ93098 351 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 EMID1Q96A84 441 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 TMEM87BQ96K49 555 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 TSPYL2Q9H2G4 693 aaPredicted RBP10.26□□□□□ -0.77
ATG4A-205ENST00000394892 IL23AQ9NPF7 189 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 MSRAQ9UJ68 235 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 CHD9Q3L8U1 2897 aa10.26□□□□□ -0.77
ATG4A-205ENST00000394892 HAS3O00219 553 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
ATG4A-205ENST00000394892 SMARCA1P28370 1054 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-205ENST00000394892 SART3Q15020 963 aaKnown RBP10.25□□□□□ -0.77
ATG4A-205ENST00000394892 RAB30Q15771 203 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-205ENST00000394892 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 CASC1Q6TDU7 716 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 TMTC3Q6ZXV5 915 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 PPM1EQ8WY54 764 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 HERVK_113Q902F9 699 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 MAP3K20Q9NYL2 800 aaKnown RBP10.25□□□□□ -0.77
ATG4A-205ENST00000394892 EYSQ5T1H1 3165 aa10.25□□□□□ -0.77
ATG4A-205ENST00000394892 CDC45O75419 566 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 TRIM71Q2Q1W2 868 aaKnown RBP10.24□□□□□ -0.77
ATG4A-205ENST00000394892 CELF3Q5SZQ8 465 aaKnown RBP10.24□□□□□ -0.77
ATG4A-205ENST00000394892 NFRKBQ6P4R8 1299 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms