RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PDHBP11177 359 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 IDEP14735 1019 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 PRPHP41219 470 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
GTF2F1-201ENST00000394456 SLC15A2Q16348 729 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 MEA1Q16626 185 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 AOC3Q16853 763 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 WHAMMP3Q1A5X7 153 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
GTF2F1-201ENST00000394456 ANKRD13CQ8N6S4 541 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 C7orf25Q9BPX7 421 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 ADAM21Q9UKJ8 722 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 FAN1Q9Y2M0 1017 aa15.03■□□□□ -0
GTF2F1-201ENST00000394456 SHMT1P34896 483 aa15.02■□□□□ -0
GTF2F1-201ENST00000394456 SOGA3Q5TF21 947 aa15.02■□□□□ -0
GTF2F1-201ENST00000394456 HHIPL2Q6UWX4 724 aa15.02■□□□□ -0
GTF2F1-201ENST00000394456 DHTKD1Q96HY7 919 aaPredicted RBP15.02■□□□□ -0
GTF2F1-201ENST00000394456 LZTS2Q9BRK4 669 aa15.02■□□□□ -0
GTF2F1-201ENST00000394456 TBC1D7Q9P0N9 293 aa15.02■□□□□ -0
GTF2F1-201ENST00000394456 SEC63Q9UGP8 760 aaKnown RBP15.02■□□□□ -0
GTF2F1-201ENST00000394456 TNNI2P48788 182 aa15.02□□□□□ -0.01
GTF2F1-201ENST00000394456 CASP8Q14790 479 aa15.02□□□□□ -0.01
GTF2F1-201ENST00000394456 MTMR9Q96QG7 549 aa15.02□□□□□ -0.01
GTF2F1-201ENST00000394456 CAPN6Q9Y6Q1 641 aa15.02□□□□□ -0.01
GTF2F1-201ENST00000394456 PSMD14O00487 310 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 TAL1P17542 331 aaPredicted RBP15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 LMAN1P49257 510 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 RAD51AP2Q09MP3 1159 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 STYK1Q6J9G0 422 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 RIN2Q8WYP3 895 aaPredicted RBP15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 ARHGAP20Q9P2F6 1191 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 CALCRLQ16602 461 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 KCTD19Q17RG1 926 aaPredicted RBP15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 DACT2Q5SW24 774 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 GALNT17Q6IS24 598 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 POTEAQ6S8J7 498 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 HAUS4Q9H6D7 363 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 NOVP48745 357 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 TSR1Q2NL82 804 aaKnown RBP15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 MMRN2Q9H8L6 949 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 RGS17Q9UGC6 210 aaPredicted RBP15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 SALL4Q9UJQ4 1053 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 SAR1BQ9Y6B6 198 aa15.01□□□□□ -0.01
GTF2F1-201ENST00000394456 PLIN4Q96Q06 1357 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 RAD21O60216 631 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 HLA-DOAP06340 250 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 CXCR5P32302 372 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 ZBED6P86452 979 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 HDXQ7Z353 690 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 HNRNPLLQ8WVV9 542 aaKnown RBP15□□□□□ -0.01
GTF2F1-201ENST00000394456 ZNF646O15015 1829 aaPredicted RBP15□□□□□ -0.01
GTF2F1-201ENST00000394456 SIPA1L1O43166 1804 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 IGKV6D-41A0A0C4DH26 115 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 LAD1O00515 517 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 NCK2O43639 380 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 MOCS3O95396 460 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 GNA11P29992 359 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 STRIP1Q5VSL9 837 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 KCTD1Q719H9 257 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 ZSCAN29Q8IWY8 852 aaPredicted RBP15□□□□□ -0.01
GTF2F1-201ENST00000394456 COG1Q8WTW3 980 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 HDAC7Q8WUI4 952 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 CCDC102AQ96A19 550 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 AK8Q96MA6 479 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 DNAJC18Q9H819 358 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 MYO1AQ9UBC5 1043 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 SIK3Q9Y2K2 1263 aa15□□□□□ -0.01
GTF2F1-201ENST00000394456 DDTLA6NHG4 134 aaPredicted RBP14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 C21orf2O43822 256 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 TTLL1O95922 423 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 FKBP15Q5T1M5 1219 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 FOXR1Q6PIV2 292 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 SV2BQ7L1I2 683 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 SNX29Q8TEQ0 813 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 CALML4Q96GE6 196 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 RIOX1Q9H6W3 641 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 POLD4Q9HCU8 107 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 STK32BQ9NY57 414 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 EIF4A3P38919 411 aaKnown RBP14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 USP14P54578 494 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 SNAP25P60880 206 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 CCDC96Q2M329 555 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 PAPD7Q5XG87 772 aaKnown RBP14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 LARP4BQ92615 738 aaKnown RBP14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 DDX12PQ92771 950 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 PLEKHA4Q9H4M7 779 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 JMJD4Q9H9V9 463 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 JADE2Q9NQC1 790 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 SWAP70Q9UH65 585 aa14.99□□□□□ -0.01
GTF2F1-201ENST00000394456 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L10C9JJH3 530 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 RRAGAQ7L523 313 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 CNKSR1Q969H4 720 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 NDST4Q9H3R1 872 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms