RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 CDO1Q16878 200 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 KCTD16Q68DU8 428 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 SSH2Q76I76 1423 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 PLA2G4BP0C869 781 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 PTF1AQ7RTS3 328 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 SLC35F6Q8N357 371 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
CDH11-202ENST00000394156 FAM169AQ9Y6X4 670 aa10.01□□□□□ -0.81
CDH11-202ENST00000394156 GNPTABQ3T906 1256 aa10□□□□□ -0.81
CDH11-202ENST00000394156 SND1Q7KZF4 910 aaKnown RBP eCLIP10□□□□□ -0.81
CDH11-202ENST00000394156 CPLX4Q7Z7G2 160 aa10□□□□□ -0.81
CDH11-202ENST00000394156 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
CDH11-202ENST00000394156 BCRP11274 1271 aa10□□□□□ -0.81
CDH11-202ENST00000394156 SYCP2LQ5T4T6 812 aa10□□□□□ -0.81
CDH11-202ENST00000394156 LMBRD2Q68DH5 695 aaPredicted RBP10□□□□□ -0.81
CDH11-202ENST00000394156 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
CDH11-202ENST00000394156 ELMO3Q96BJ8 720 aa10□□□□□ -0.81
CDH11-202ENST00000394156 KIF2CQ99661 725 aa10□□□□□ -0.81
CDH11-202ENST00000394156 FOXP1Q9H334 677 aaPredicted RBP10□□□□□ -0.81
CDH11-202ENST00000394156 ARMCX3Q9UH62 379 aaPredicted RBP10□□□□□ -0.81
CDH11-202ENST00000394156 KDM3AQ9Y4C1 1321 aa10□□□□□ -0.81
CDH11-202ENST00000394156 IQSEC2Q5JU85 1478 aa10□□□□□ -0.81
CDH11-202ENST00000394156 FAM26FQ5R3K3 315 aa10□□□□□ -0.81
CDH11-202ENST00000394156 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
CDH11-202ENST00000394156 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
CDH11-202ENST00000394156 TXNDC16Q9P2K2 825 aa10□□□□□ -0.81
CDH11-202ENST00000394156 ARHGEF28Q8N1W1 1705 aaKnown RBP10□□□□□ -0.81
CDH11-202ENST00000394156 PDIA6Q15084 440 aa10□□□□□ -0.81
CDH11-202ENST00000394156 ASPRV1Q53RT3 343 aa10□□□□□ -0.81
CDH11-202ENST00000394156 TMEM39BQ9GZU3 492 aa10□□□□□ -0.81
CDH11-202ENST00000394156 BHMT2Q9H2M3 363 aa10□□□□□ -0.81
CDH11-202ENST00000394156 PRDM5Q9NQX1 630 aaPredicted RBP10□□□□□ -0.81
CDH11-202ENST00000394156 ARHGAP31Q2M1Z3 1444 aa10□□□□□ -0.81
CDH11-202ENST00000394156 SPATA31A1Q5TZJ5 1347 aa10□□□□□ -0.81
CDH11-202ENST00000394156 HP1BP3Q5SSJ5 553 aaPredicted RBP10□□□□□ -0.81
CDH11-202ENST00000394156 CFAP58Q5T655 872 aa10□□□□□ -0.81
CDH11-202ENST00000394156 DCAF15Q66K64 600 aa10□□□□□ -0.81
CDH11-202ENST00000394156 TOGARAM2Q6ZUX3 1019 aa10□□□□□ -0.81
CDH11-202ENST00000394156 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
CDH11-202ENST00000394156 GSPT2Q8IYD1 628 aaKnown RBP10□□□□□ -0.81
CDH11-202ENST00000394156 FLAD1Q8NFF5 587 aa10□□□□□ -0.81
CDH11-202ENST00000394156 PLVAPQ9BX97 442 aa10□□□□□ -0.81
CDH11-202ENST00000394156 AP1M1Q9BXS5 423 aa10□□□□□ -0.81
CDH11-202ENST00000394156 KCNQ5Q9NR82 932 aa10□□□□□ -0.81
CDH11-202ENST00000394156 FCER1AP12319 257 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 CCND2P30279 289 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 VAV2P52735 878 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 KRT81Q14533 505 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 RPS6KA1Q15418 735 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 TMCO4Q5TGY1 634 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 ELP3Q9H9T3 547 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 ZDHHC9Q9Y397 364 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 SETBP1Q9Y6X0 1596 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
CDH11-202ENST00000394156 FOXD4Q12950 439 aaPredicted RBP9.99□□□□□ -0.81
CDH11-202ENST00000394156 MTMR2Q13614 643 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 DYDC2Q96IM9 177 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 KRT12Q99456 494 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 GCNT4Q9P109 453 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 EXOC3L4Q17RC7 722 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 DENND2CQ68D51 928 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 PRR5LQ6MZQ0 368 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 SLC10A4Q96EP9 437 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 FERMT1Q9BQL6 677 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 NT5C3AQ9H0P0 336 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 SUDS3Q9H7L9 328 aaPredicted RBP9.99□□□□□ -0.81
CDH11-202ENST00000394156 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 STAG1Q8WVM7 1258 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 RNF26Q9BY78 433 aaPredicted RBP9.99□□□□□ -0.81
CDH11-202ENST00000394156 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 PACSIN2Q9UNF0 486 aaPredicted RBP9.99□□□□□ -0.81
CDH11-202ENST00000394156 STAT1P42224 750 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 LIN9Q5TKA1 542 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 RNF207Q6ZRF8 634 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 COA1Q9GZY4 146 aa9.99□□□□□ -0.81
CDH11-202ENST00000394156 KRIT1O00522 736 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 GYS2P54840 703 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 FAM204AQ9H8W3 233 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 CALCOCO2Q13137 446 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 SNRNP48Q6IEG0 339 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 ABCF3Q9NUQ8 709 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 PNMA6FA0A0J9YX94 578 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 LONP1P36776 959 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 TNNC1P63316 161 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 KCTD2Q14681 263 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 PDXDC2PQ6P474 469 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 UBL4BQ8N7F7 174 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 TBC1D16Q8TBP0 767 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 MTUS1Q9ULD2 1270 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 MROH7-TTC4A0A0A0MT08 1334 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 ZNF365Q70YC5 407 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 NME8Q8N427 588 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms