RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 SCG2P13521 617 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
SFXN3-202ENST00000393459 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
SFXN3-202ENST00000393459 TUBB4BP68371 445 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 PUM3Q15397 648 aaKnown RBP16.04■□□□□ 0.16
SFXN3-202ENST00000393459 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 P2RX5Q93086 422 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
SFXN3-202ENST00000393459 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 MYH6P13533 1939 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 IFFO1Q0D2I5 559 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 KRT71Q3SY84 523 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 CFAP221Q4G0U5 840 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 OSBPL7Q9BZF2 842 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 VEZTQ9HBM0 779 aa16.04■□□□□ 0.16
SFXN3-202ENST00000393459 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
SFXN3-202ENST00000393459 SEMA3EO15041 775 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 TROAPQ12815 778 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 MYO1EQ12965 1108 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CCDC38Q502W7 563 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 SWT1Q5T5J6 900 aaKnown RBP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 KLHDC7AQ5VTJ3 777 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 TEX11Q8IYF3 940 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 AMACRQ9UHK6 382 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 USP17L3A6NCW0 530 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 USP17L4A6NCW7 530 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CYB5D1Q6P9G0 228 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 USP17L1Q7RTZ2 530 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 NDST4Q9H3R1 872 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 STK38LQ9Y2H1 464 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 FOXO6A8MYZ6 492 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CHUKO15111 745 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 ITGA4P13612 1032 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 NEDD9Q14511 834 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CABP7Q86V35 215 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 NOX5Q96PH1 765 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 RNF41Q9H4P4 317 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 CHORDC1Q9UHD1 332 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-202ENST00000393459 ATP8A1Q9Y2Q0 1164 aa16.03■□□□□ 0.16
SFXN3-202ENST00000393459 GCOM1H8Y6P7 765 aaPredicted RBP16.02■□□□□ 0.16
SFXN3-202ENST00000393459 DAPK3O43293 454 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 GSCP56915 257 aaPredicted RBP16.02■□□□□ 0.16
SFXN3-202ENST00000393459 SEC23AQ15436 765 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 SNCBQ16143 134 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 BLIDQ8IZY5 108 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 RPGRIP1Q96KN7 1286 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 ATP6V1G3Q96LB4 118 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
SFXN3-202ENST00000393459 KCNQ4P56696 695 aa16.02■□□□□ 0.15
SFXN3-202ENST00000393459 PIK3R5Q8WYR1 880 aa16.02■□□□□ 0.15
SFXN3-202ENST00000393459 BIN2Q9UBW5 565 aaPredicted RBP16.02■□□□□ 0.15
SFXN3-202ENST00000393459 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.15
SFXN3-202ENST00000393459 WDR19Q8NEZ3 1342 aa16.02■□□□□ 0.15
SFXN3-202ENST00000393459 POTEMA6NI47 508 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 KLRC4O43908 158 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 ACTN1P12814 892 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 EEF1GP26641 437 aaKnown RBP16.01■□□□□ 0.15
SFXN3-202ENST00000393459 PAK2Q13177 524 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 EMBQ6PCB8 327 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 MICALCLQ6ZW33 695 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 PARP9Q8IXQ6 854 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 KIF2BQ8N4N8 673 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 FAM167BQ9BTA0 163 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 FBXL5Q9UKA1 691 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 ENO4A6NNW6 628 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 TRAF5O00463 557 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 TCP1P17987 556 aaKnown RBP16.01■□□□□ 0.15
SFXN3-202ENST00000393459 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 TMTC2Q8N394 836 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 MMGT1Q8N4V1 131 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 KCNV2Q8TDN2 545 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 PIGBQ92521 554 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 STAMBPL1Q96FJ0 436 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
SFXN3-202ENST00000393459 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
SFXN3-202ENST00000393459 USP17L8P0C7I0 530 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 HSD17B3P37058 310 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 ERVK-9P63128 1117 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 FUT2Q10981 343 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 LRRC14Q15048 493 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 KIAA0895Q8NCT3 520 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 DONSONQ9NYP3 566 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 MARCH6O60337 910 aa16■□□□□ 0.15
SFXN3-202ENST00000393459 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms