RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 C21orf2O43822 256 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 P2RX5Q93086 422 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 MCM8Q9UJA3 840 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 SLC5A1P13866 664 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 FLT3P36888 993 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 SLC1A4P43007 532 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
PDCD4-202ENST00000393104 ACTN3Q08043 901 aaPredicted RBP12.67□□□□□ -0.38
PDCD4-202ENST00000393104 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 COL11A2P13942 1736 aaPredicted RBP12.67□□□□□ -0.38
PDCD4-202ENST00000393104 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 ZPR1O75312 459 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 CYP2D6P10635 497 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 TM4SF1P30408 202 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
PDCD4-202ENST00000393104 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
PDCD4-202ENST00000393104 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 DDAH1O94760 285 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CCNE1P24864 410 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 TRIM58Q8NG06 486 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 ESR2Q92731 530 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CAPN7Q9Y6W3 813 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC189A1A4V9 331 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-202ENST00000393104 TBC1D8BQ0IIM8 1120 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
PDCD4-202ENST00000393104 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
PDCD4-202ENST00000393104 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 PLCG1P19174 1290 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 INPP5BP32019 993 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 PROM2Q8N271 834 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
PDCD4-202ENST00000393104 MAD2L2Q9UI95 211 aa12.66□□□□□ -0.38
PDCD4-202ENST00000393104 STAT6P42226 847 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 TLDC1Q6P9B6 456 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 TMED8Q6PL24 325 aaPredicted RBP12.65□□□□□ -0.38
PDCD4-202ENST00000393104 FGFBP2Q9BYJ0 223 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.38
PDCD4-202ENST00000393104 ERVK-9P63128 1117 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 EHBP1Q8NDI1 1231 aa12.65□□□□□ -0.38
PDCD4-202ENST00000393104 CCDC43Q96MW1 224 aaKnown RBP12.65□□□□□ -0.38
PDCD4-202ENST00000393104 ORC4O43929 436 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 PPP1R37O75864 691 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.39
PDCD4-202ENST00000393104 KLRK1P26718 216 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.39
PDCD4-202ENST00000393104 ERFEQ4G0M1 354 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 SETDB2Q96T68 719 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 EPB41L4BQ9H329 900 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 BSDC1Q9NW68 430 aaPredicted RBP12.65□□□□□ -0.39
PDCD4-202ENST00000393104 NENFQ9UMX5 172 aa12.65□□□□□ -0.39
PDCD4-202ENST00000393104 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 CYP7A1P22680 504 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 CYLC1P35663 651 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 MDH1P40925 334 aaKnown RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 BLIDQ8IZY5 108 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 TMBIM4Q9HC24 238 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 GGA2Q9UJY4 613 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 MEI1Q5TIA1 1274 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 SLC51AQ86UW1 340 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 DDX20Q9UHI6 824 aaKnown RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PCDHA4Q9UN74 947 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PCDHGC5Q9Y5F6 944 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 IRS2Q9Y4H2 1338 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 STXBP3O00186 592 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 GYS1P13807 737 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 SMTNP53814 917 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PREPLQ4J6C6 727 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 VWA3BQ502W6 1294 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms