RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 NDST4Q9H3R1 872 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 MAD1L1Q9Y6D9 718 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 HNRNPDLO14979 420 aaKnown RBP14.27□□□□□ -0.12
LCA5-202ENST00000392959 INHBAP08476 426 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.12
LCA5-202ENST00000392959 KIF11P52732 1056 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 GABPAQ06546 454 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 PRKG1Q13976 671 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 RASIP1Q5U651 963 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 NXNQ6DKJ4 435 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.27□□□□□ -0.12
LCA5-202ENST00000392959 ZBTB1Q9Y2K1 713 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 LRRN2O75325 713 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.12
LCA5-202ENST00000392959 E2F5Q15329 346 aa14.27□□□□□ -0.12
LCA5-202ENST00000392959 LRRIQ4A6NIV6 560 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 NR1D1P20393 614 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 PEX19P40855 299 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 SGO2Q562F6 1265 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 EMBQ6PCB8 327 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 METTL13Q8N6R0 699 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 GSDMBQ8TAX9 411 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 Q9H521 79 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 SUGCTQ9HAC7 445 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 STK32BQ9NY57 414 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 H7C0C1 242 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 ECEL1O95672 775 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 MAPK4P31152 587 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 ATP5OP48047 213 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 DBN1Q16643 649 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 PDLIM2Q96JY6 352 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 MMS19Q96T76 1030 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 NACA2Q9H009 215 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 CNOT10Q9H9A5 744 aaKnown RBP14.27□□□□□ -0.13
LCA5-202ENST00000392959 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 ATP7BP35670 1465 aa14.27□□□□□ -0.13
LCA5-202ENST00000392959 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PLCG1P19174 1290 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 RNASELQ05823 741 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 ARHGEF18Q6ZSZ5 1173 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PDZD4Q76G19 769 aaPredicted RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 SCYL3Q8IZE3 742 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 CDKL2Q92772 493 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 CAPN9O14815 690 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 SERPING1P05155 500 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 TMOD1P28289 359 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 TRIM11Q96F44 468 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PTPREP23469 700 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 SIK1P57059 783 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 NIM1KQ8IY84 436 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 NEK9Q8TD19 979 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PNMA2Q9UL42 364 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 hCG_1984214I3L0E3 225 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 CLIC2O15247 247 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 GFPT2O94808 682 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 RPSAP08865 295 aaKnown RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 ADCY1Q08828 1119 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 KMT5BQ4FZB7 885 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 ZNF713Q8N859 430 aaPredicted RBP14.26□□□□□ -0.13
LCA5-202ENST00000392959 PIGSQ96S52 555 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 ADPGKQ9BRR6 497 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
LCA5-202ENST00000392959 PSMD2Q13200 908 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 ADAM21Q9UKJ8 722 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 TTLL1O95922 423 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
LCA5-202ENST00000392959 POLGP54098 1239 aaPredicted RBP14.25□□□□□ -0.13
LCA5-202ENST00000392959 PDE1BQ01064 536 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 SLC7A5Q01650 507 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 SLMAPQ14BN4 828 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 SLCO1A2P46721 670 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
LCA5-202ENST00000392959 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms