RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 BTDP43251 543 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PPARAQ07869 468 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 GTF2H3Q13889 308 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KRT71Q3SY84 523 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 GLE1Q53GS7 698 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 PDXDC2PQ6P474 469 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KCNV1Q6PIU1 500 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ARHGEF18Q6ZSZ5 1173 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 OOSP2Q86WS3 158 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 OR9Q1Q8NGQ5 310 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 PI4K2BQ8TCG2 481 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 U2AF1L4Q8WU68 220 aaKnown RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 SKA1Q96BD8 255 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CCDC127Q96BQ5 260 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 CEP170P1Q96L14 293 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KIFC3Q9BVG8 833 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 SPZ1Q9BXG8 430 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 DCTPP1Q9H773 170 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.32□□□□□ -1.724e-7■■■□□ 14.9
UBR3-202ENST00000392632 RGL1Q9NZL6 768 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 AKAP7Q9P0M2 348 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.32□□□□□ -1.72
UBR3-202ENST00000392632 KDRP35968 1356 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 KDM5BQ9UGL1 1544 aa4.32□□□□□ -1.72
UBR3-202ENST00000392632 SBNO1A3KN83 1393 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZNF804BA4D1E1 1349 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZNF263O14978 683 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 GTPBP6O43824 516 aaPredicted RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 PRPSAP2O60256 369 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 HUS1O60921 280 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TTLL1O95922 423 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 MYL3P08590 195 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ATF2P15336 505 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TRAPPC10P48553 1259 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 MED21Q13503 144 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PPP4R4Q6NUP7 873 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ARMC6Q6NXE6 501 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PODNQ7Z5L7 613 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 KIRREL3Q8IZU9 778 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 C7orf31Q8N865 590 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 MCPH1Q8NEM0 835 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TOPBP1Q92547 1522 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 NRBF2Q96F24 287 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PAWRQ96IZ0 340 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 TSSK1BQ9BXA7 367 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 SYNDIG1Q9H7V2 258 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 SERPINB13Q9UIV8 391 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PCDHGB4Q9UN71 923 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PCDHB4Q9Y5E5 795 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 LOC102724428A0A0B4J2F2 783 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 USP17L3A6NCW0 530 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 USP17L4A6NCW7 530 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ASB14A6NK59 587 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TNPO2O14787 897 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 POLR2DO15514 142 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 SYF2O95926 243 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 CPP00450 1065 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 APOEP02649 317 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 USP17L8P0C7I0 530 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 RALAP11233 206 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TCP1P17987 556 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 IL6STP40189 918 aaPredicted RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 CTSWP56202 376 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 SIK1P57059 783 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 YWHAGP61981 247 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBR3-202ENST00000392632 ESRRGP62508 458 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZBTB17Q13105 803 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PSMD2Q13200 908 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TTLL4Q14679 1199 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 TMEM132BQ14DG7 1078 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 KARSQ15046 597 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 PHKG1Q16816 387 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 KRBA2Q6ZNG9 492 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 USP17L1Q7RTZ2 530 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 CCDC13Q8IYE1 715 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZNF654Q8IZM8 581 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 MICALL1Q8N3F8 863 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ARL8AQ96BM9 186 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ULK4Q96C45 1275 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 MRFAP1L1Q96HT8 127 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 AK8Q96MA6 479 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 EPAS1Q99814 870 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZNF577Q9BSK1 485 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 DSCC1Q9BVC3 393 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 FAM129AQ9BZQ8 928 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 C2orf40Q9H1Z8 148 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 DNAJC17Q9NVM6 304 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 UTP6Q9NYH9 597 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 SFMBT1Q9UHJ3 866 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 DDX25Q9UHL0 483 aaKnown RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 STAP1Q9ULZ2 295 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 SUGT1Q9Y2Z0 365 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 ZNF532Q9HCE3 1301 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 SYNJ2BP-COX16A0A087WUM0 186 aa4.31□□□□□ -1.72
UBR3-202ENST00000392632 PCCAP05165 728 aaPredicted RBP4.31□□□□□ -1.72
UBR3-202ENST00000392632 PYGBP11216 843 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms