RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 CD4P01730 458 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 RAG1P15918 1043 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 SMARCA1P28370 1054 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 FUT2Q10981 343 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 SHHQ15465 462 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 RTN1Q16799 776 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 FAM217BQ9NTX9 383 aaPredicted RBP16.07■□□□□ 0.16
CCDC57-204ENST00000392345 DDX41Q9UJV9 622 aaKnown RBP16.07■□□□□ 0.16
CCDC57-204ENST00000392345 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
CCDC57-204ENST00000392345 UMODL1Q5DID0 1318 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 MEIS2O14770 477 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 ZBTB43O43298 467 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 B4GALT4O60513 344 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 MMP3P08254 477 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 TRAF1Q13077 416 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 Q6ZUG5 572 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 VSIG10LQ86VR7 867 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
CCDC57-204ENST00000392345 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 POLR3EQ9NVU0 708 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 MAP3K20Q9NYL2 800 aaKnown RBP16.06■□□□□ 0.16
CCDC57-204ENST00000392345 MRVI1Q9Y6F6 885 aa16.06■□□□□ 0.16
CCDC57-204ENST00000392345 REC8O95072 547 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 TIMP1P01033 207 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 GH1P01241 217 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
CCDC57-204ENST00000392345 CDC27P30260 824 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 CCND2P30279 289 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 MRPS9P82933 396 aaKnown RBP16.05■□□□□ 0.16
CCDC57-204ENST00000392345 SP2Q02086 613 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 UBE2SQ16763 222 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 LRIT3Q3SXY7 679 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 ERICH6BQ5W0A0 696 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 SAMD3Q8N6K7 520 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
CCDC57-204ENST00000392345 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
CCDC57-204ENST00000392345 COL6A3P12111 3177 aa16.05■□□□□ 0.16
CCDC57-204ENST00000392345 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
CCDC57-204ENST00000392345 UBA1P22314 1058 aaKnown RBP16.04■□□□□ 0.16
CCDC57-204ENST00000392345 RPS6KB1P23443 525 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 CYP2C18P33260 490 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 NBPF20Q3BBV1 942 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 BRF1Q92994 677 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
CCDC57-204ENST00000392345 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
CCDC57-204ENST00000392345 RBM28Q9NW13 759 aaKnown RBP16.04■□□□□ 0.16
CCDC57-204ENST00000392345 RBAK-RBAKDNI3L0D1 243 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 PIK3CDO00329 1044 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 TLR3O15455 904 aaKnown RBP16.03■□□□□ 0.16
CCDC57-204ENST00000392345 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
CCDC57-204ENST00000392345 CHMP4BP1P59074 171 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 FPGSQ05932 587 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 SEMA3FQ13275 785 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 FAM47CQ5HY64 1035 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 SMARCC2Q8TAQ2 1214 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 KAT2BQ92831 832 aa16.03■□□□□ 0.16
CCDC57-204ENST00000392345 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 CDH23Q9H251 3354 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 GGPS1O95749 300 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 ZNF286BP0CG31 522 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 CYP2C9P11712 490 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.16
CCDC57-204ENST00000392345 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC57-204ENST00000392345 FGD1P98174 961 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 BRDTQ58F21 947 aaPredicted RBP16.02■□□□□ 0.16
CCDC57-204ENST00000392345 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 Q7L0L9 218 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 CUL5Q93034 780 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.16
CCDC57-204ENST00000392345 NOC4LQ9BVI4 516 aaKnown RBP16.02■□□□□ 0.16
CCDC57-204ENST00000392345 USP26Q9BXU7 913 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 WNT8AQ9H1J5 351 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 HIPK3Q9H422 1215 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 RTEL1Q9NZ71 1219 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
CCDC57-204ENST00000392345 NID2Q14112 1375 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 STXBP3O00186 592 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 PPFIA3O75145 1194 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 ACRP10323 421 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 CSF2RAP15509 400 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
CCDC57-204ENST00000392345 MYSM1Q5VVJ2 828 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
CCDC57-204ENST00000392345 PPTC7Q8NI37 304 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 INPP4AQ96PE3 977 aaPredicted RBP16.01■□□□□ 0.15
CCDC57-204ENST00000392345 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
CCDC57-204ENST00000392345 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms