RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 SH2D4AQ9H788 454 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 ST7Q9NRC1 585 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 DOCK1Q14185 1865 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 ESYT2A0FGR8 921 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L15C9J2P7 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L13C9JLJ4 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L11C9JVI0 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L18D6R9N7 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L22D6RA61 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L17D6RBQ6 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L19D6RCP7 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L20D6RJB6 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 CCNT1O60563 726 aaKnown RBP22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 PBX1P40424 430 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L24Q0WX57 530 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 USP17L6PQ6QN14 398 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 KRT25Q7Z3Z0 450 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 GRAMD1CQ8IYS0 662 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 RIC8AQ9NPQ8 531 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 SYNPO2Q9UMS6 1093 aa22.28■■□□□ 1.16
CSNK1D-203ENST00000392334 ATP2C1P98194 919 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 CUL4BQ13620 913 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 SCYL3Q8IZE3 742 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 RABGGTAQ92696 567 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 CUL5Q93034 780 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 EPSTI1Q96J88 318 aa22.27■■□□□ 1.16
CSNK1D-203ENST00000392334 MTMR2Q13614 643 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 IL17AQ16552 155 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 HSP90AA4PQ58FG1 418 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 CDKAL1Q5VV42 579 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 FBXO11Q86XK2 927 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 FAM177A1Q8N128 213 aaPredicted RBP22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 AMNQ9BXJ7 453 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 TMEM60Q9H2L4 133 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 PPP1R12BO60237 982 aaPredicted RBP22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 CCDC175P0C221 793 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 SPP2Q13103 211 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 CTAGE1Q96RT6 745 aa22.26■■□□□ 1.15
CSNK1D-203ENST00000392334 C4orf32Q8N8J7 132 aa22.25■■□□□ 1.15
CSNK1D-203ENST00000392334 GSDMAQ96QA5 445 aa22.25■■□□□ 1.15
CSNK1D-203ENST00000392334 ZNF408Q9H9D4 720 aa22.25■■□□□ 1.15
CSNK1D-203ENST00000392334 OTOFQ9HC10 1997 aa22.25■■□□□ 1.15
CSNK1D-203ENST00000392334 PTPRAP18433 802 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 FECHP22830 423 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 MRPL12P52815 198 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 PPP1R18Q6NYC8 613 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 CC2D1AQ6P1N0 951 aaPredicted RBP22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 NEK8Q86SG6 692 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 ADD3Q9UEY8 706 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 SYNRGQ9UMZ2 1314 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 CDC25AP30304 524 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 CYP2C19P33261 490 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 VGLL4Q14135 290 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 TTLL12Q14166 644 aaPredicted RBP22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 LDHDQ86WU2 507 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 SYMPKQ92797 1274 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 PAGE5Q96GU1 130 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 PICK1Q9NRD5 415 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 ZHX2Q9Y6X8 837 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 ITIH6Q6UXX5 1313 aa22.24■■□□□ 1.15
CSNK1D-203ENST00000392334 A0A087X0B3 334 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 TBC1D8O95759 1140 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 NF2P35240 595 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 DPYDQ12882 1025 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 TUBB2AQ13885 445 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 CHURC1Q8WUH1 139 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 GOLGA1Q92805 767 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 DHX58Q96C10 678 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 CCDC51Q96ER9 411 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 TUBB2BQ9BVA1 445 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 MRPL44Q9H9J2 332 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 ADGRG1Q9Y653 693 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 CLK2P49760 499 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 CNKSR2Q8WXI2 1034 aa22.23■■□□□ 1.15
CSNK1D-203ENST00000392334 PAPPA2Q9BXP8 1791 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 TEX33O43247 280 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 CD44P16070 742 aaKnown RBP22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 PPFIBP1Q86W92 1011 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 CLMNQ96JQ2 1002 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 TANGO6Q9C0B7 1094 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 KIAA1683Q9H0B3 1180 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 EMILIN3Q9NT22 766 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 SNCAIPQ9Y6H5 919 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 PHIPQ8WWQ0 1821 aa22.22■■□□□ 1.15
CSNK1D-203ENST00000392334 EDIL3O43854 480 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 HOXA13P31271 388 aaPredicted RBP22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 IGSF22Q8N9C0 903 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 DESI2Q9BSY9 194 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 PPP1R3GB7ZBB8 358 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 MEIS2O14770 477 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 SEC31AO94979 1220 aaKnown RBP22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 TDP2O95551 362 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 RBL2Q08999 1139 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 FILIP1LQ4L180 1135 aa22.21■■□□□ 1.15
CSNK1D-203ENST00000392334 TEX35Q5T0J7 233 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms