RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 FBXO16Q8IX29 292 aaPredicted RBP17.03■□□□□ 0.32
SUMO1-203ENST00000392246 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
SUMO1-203ENST00000392246 CCDC194A0A1B0GVG4 234 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 H3BQV1 296 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 SEPT4O43236 478 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.32
SUMO1-203ENST00000392246 CCL5P13501 91 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 CNGA1P29973 690 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 MRPS9P82933 396 aaKnown RBP17.02■□□□□ 0.32
SUMO1-203ENST00000392246 ARHGAP4P98171 946 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 TAPT1Q6NXT6 567 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
SUMO1-203ENST00000392246 AKR1A1P14550 325 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 NR5A1Q13285 461 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 NONOQ15233 471 aaKnown RBP eCLIP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 CRYGNQ8WXF5 182 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.311e-6■■□□□ 11.5
SUMO1-203ENST00000392246 RNF208Q9H0X6 261 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 FOXP1Q9H334 677 aaPredicted RBP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 MSCO60682 206 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 CYP3A4P08684 503 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 USP11P51784 963 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 IQSEC1Q6DN90 963 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 TNS4Q8IZW8 715 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 SCFD2Q8WU76 684 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
SUMO1-203ENST00000392246 PDGFCQ9NRA1 345 aa17.01■□□□□ 0.31
SUMO1-203ENST00000392246 ZNF76P36508 570 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
SUMO1-203ENST00000392246 TTLL4Q14679 1199 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 NLRX1Q86UT6 975 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
SUMO1-203ENST00000392246 WDR11Q9BZH6 1224 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
SUMO1-203ENST00000392246 UBIAD1Q9Y5Z9 338 aa17■□□□□ 0.31
SUMO1-203ENST00000392246 RGS20O76081 388 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 INF2Q27J81 1249 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 CEP55Q53EZ4 464 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 JADE2Q9NQC1 790 aa16.99■□□□□ 0.31
SUMO1-203ENST00000392246 MAFGO15525 162 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 TGFB3P10600 412 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 RARBP10826 455 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 ITGB5P18084 799 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 SYT1P21579 422 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
SUMO1-203ENST00000392246 ICAM3P32942 547 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 CIITAP33076 1130 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 EARS2Q5JPH6 523 aaKnown RBP16.98■□□□□ 0.31
SUMO1-203ENST00000392246 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 NEK8Q86SG6 692 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 GPRASP2Q96D09 838 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 CDHR1Q96JP9 859 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 MRVI1Q9Y6F6 885 aa16.98■□□□□ 0.31
SUMO1-203ENST00000392246 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.97■□□□□ 0.31
SUMO1-203ENST00000392246 NKRFO15226 690 aaKnown RBP eCLIP16.97■□□□□ 0.31
SUMO1-203ENST00000392246 FIBPO43427 364 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
SUMO1-203ENST00000392246 GJB1P08034 283 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 TXNP10599 105 aaKnown RBP16.97■□□□□ 0.31
SUMO1-203ENST00000392246 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
SUMO1-203ENST00000392246 SMPD1P17405 629 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 DUSP28Q4G0W2 176 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 CCDC62Q6P9F0 684 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 NIPA1Q7RTP0 329 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 DEFB118Q96PH6 123 aa16.97■□□□□ 0.31
SUMO1-203ENST00000392246 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
SUMO1-203ENST00000392246 FAM205CA6NFA0 338 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 SPATA31C2B4DYI2 1134 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 KIF28PB7ZC32 967 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 FAM86B1E9PN63 330 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 MEIS1O00470 390 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 EDIL3O43854 480 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 FAM86B2P0C5J1 330 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 MTMR1Q13613 665 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 ANO1Q5XXA6 986 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 LHX8Q68G74 356 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.31
SUMO1-203ENST00000392246 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
SUMO1-203ENST00000392246 DDX41Q9UJV9 622 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms