RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ANKRD33Q7Z3H0 272 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 HEATR3Q7Z4Q2 680 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 VSIG10LQ86VR7 867 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 CCDC82Q8N4S0 544 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 PSTPIP2Q9H939 334 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.07
GGPS1-203ENST00000391855 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.07
GGPS1-203ENST00000391855 DCDC2CA8MYV0 355 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 CLTBP09497 229 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 MYCLP12524 364 aaPredicted RBP14.58□□□□□ -0.08
GGPS1-203ENST00000391855 BMP8BP34820 402 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 TLE2Q04725 743 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 GNPTABQ3T906 1256 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 VTI1AQ96AJ9 217 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 GDF15Q99988 308 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 LBHD1Q9BQE6 289 aaPredicted RBP14.58□□□□□ -0.08
GGPS1-203ENST00000391855 PRO3102Q9H379 93 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 EHMT1Q9H9B1 1298 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 PDLIM7Q9NR12 457 aa14.58□□□□□ -0.08
GGPS1-203ENST00000391855 FAM217BQ9NTX9 383 aaPredicted RBP14.58□□□□□ -0.08
GGPS1-203ENST00000391855 A6NJR5 290 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 ARVCFO00192 962 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 MEIS2O14770 477 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 TLR3O15455 904 aaKnown RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 TGFB3P10600 412 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 SYN1P17600 705 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 CDC27P30260 824 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 NAPAP54920 295 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 IRX5P78411 483 aaPredicted RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 HABP4Q5JVS0 413 aaKnown RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
GGPS1-203ENST00000391855 CCDC12Q8WUD4 166 aaPredicted RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 EMID1Q96A84 441 aaPredicted RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 MTG1Q9BT17 334 aaPredicted RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 PRDM5Q9NQX1 630 aaPredicted RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
GGPS1-203ENST00000391855 hCG_1642624A0A1W2PR95 340 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 SPDYE3A6NKU9 549 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 PQBP1O60828 265 aaKnown RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 ARIH2O95376 493 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 ADD1P35611 737 aaKnown RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 CDK7P50613 346 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 AKAP17AQ02040 695 aaKnown RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 ARHGAP1Q07960 439 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 TMEM63BQ5T3F8 832 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 PCNX4Q63HM2 1172 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 WWC2Q6AWC2 1192 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 USP17L6PQ6QN14 398 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 SLC43A3Q8NBI5 491 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 GPKOWQ92917 476 aaPredicted RBP eCLIP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 ZNF274Q96GC6 653 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 RNF26Q9BY78 433 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 PDRG1Q9NUG6 133 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 BARHL2Q9NY43 387 aa14.56□□□□□ -0.08
GGPS1-203ENST00000391855 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-203ENST00000391855 KIAA0355O15063 1070 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 PRPF3O43395 683 aaKnown RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 SCG2P13521 617 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 IFNAR1P17181 557 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 PURAQ00577 322 aaKnown RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 ITGA7Q13683 1181 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 TOB2Q14106 344 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 PFKFB3Q16875 520 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 COPS5Q92905 334 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 INPP4AQ96PE3 977 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-203ENST00000391855 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
GGPS1-203ENST00000391855 ESYT2A0FGR8 921 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 STXBP3O00186 592 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 FIBPO43427 364 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 RGS20O76081 388 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 FOSP01100 380 aaPredicted RBP14.54□□□□□ -0.08
GGPS1-203ENST00000391855 MMP3P08254 477 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 MYL3P08590 195 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 ICAM3P32942 547 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 ADCY7P51828 1080 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 AP3B2Q13367 1082 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 LY6KQ17RY6 165 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 FAM126BQ8IXS8 530 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 CDHR1Q96JP9 859 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 TMEM39AQ9NV64 488 aa14.54□□□□□ -0.08
GGPS1-203ENST00000391855 PTGS1P23219 599 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 PTPN11Q06124 597 aaPredicted RBP14.53□□□□□ -0.08
GGPS1-203ENST00000391855 FAAP100Q0VG06 881 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 NEDD9Q14511 834 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 DHX37Q8IY37 1157 aaKnown RBP14.53□□□□□ -0.08
GGPS1-203ENST00000391855 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 CCDC148Q8NFR7 591 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms