RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DCDC2CA8MYV0 355 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 NUTM2EB1AL46 878 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 B4DLN1 442 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PATL2C9JE40 543 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CES2O00748 559 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 IRF6O14896 467 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LIN7AO14910 233 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PRPF3O43395 683 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 RAD51CO43502 376 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ORC4O43929 436 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 HSF2BPO75031 334 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ECM2O94769 699 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 HEXIM1O94992 359 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PLEKHA8P1O95397 391 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ATP6V1G2O95670 118 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 GCP02774 474 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 APPP05067 770 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LINGO3P0C6S8 592 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 VEGFAP15692 232 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ITGA6P23229 1130 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CCNE1P24864 410 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 FLT3P36888 993 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 HSD17B3P37058 310 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 EIF4A3P38919 411 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 SLC1A4P43007 532 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PHKA1P46020 1223 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TRAPPC10P48553 1259 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CCNG1P51959 295 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 KIF11P52732 1056 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 NCALDP61601 193 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ATP2B2Q01814 1243 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 EHHADHQ08426 723 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ADCY2Q08462 1091 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 KCNMA1Q12791 1236 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TROAPQ12815 778 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PLS1Q14651 629 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 GALNTL6Q49A17 601 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 GRIPAP1Q4V328 841 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CMPK2Q5EBM0 449 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TTC38Q5R3I4 469 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 AKNAD1Q5T1N1 836 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CFAP58Q5T655 872 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ERMARDQ5T6L9 678 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CRELD2Q6UXH1 353 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LRRC55Q6ZSA7 311 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 MICALCLQ6ZW33 695 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TMTC3Q6ZXV5 915 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 BZW1Q7L1Q6 419 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PIGWQ7Z7B1 504 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 KIAA1328Q86T90 577 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ZC3H3Q8IXZ2 948 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 IFNL3Q8IZI9 196 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LRRC57Q8N9N7 239 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 KIAA0895Q8NCT3 520 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 RNF217Q8TC41 542 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 NOC3LQ8WTT2 800 aaKnown RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LMBR1Q8WVP7 490 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 WASF1Q92558 559 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CENPTQ96BT3 561 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 IFT43Q96FT9 208 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 MS4A14Q96JA4 679 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 SEC16BQ96JE7 1060 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 HINFPQ9BQA5 517 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 FAM129AQ9BZQ8 928 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TSGA10Q9BZW7 698 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM6Q9C030 488 aaPredicted RBP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CCSER1Q9C0I3 900 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ISCUQ9H1K1 167 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 TMEM60Q9H2L4 133 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 KDM4CQ9H3R0 1056 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 NOD2Q9HC29 1040 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 SLC24A3Q9HC58 644 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CABP5Q9NP86 173 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 EXOC1Q9NV70 894 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CEP126Q9P2H0 1117 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 LRWD1Q9UFC0 647 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 CEP131Q9UPN4 1083 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 AGAP1Q9UPQ3 857 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PLAAQ9Y263 795 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAV39-201ENST00000390466 C15orf41Q9Y2V0 281 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 PCDHA13Q9Y5I0 950 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF646O15015 1829 aaPredicted RBP3.81□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 COL16A1Q07092 1604 aaPredicted RBP3.81□□□□□ -1.8
TRAV39-201ENST00000390466 RTL9Q8NET4 1388 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 ANKRD18BA2A2Z9 1011 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 GMNCA6NCL1 334 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 BTNL10A8MVZ5 291 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 F8VZ95 297 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 BACH1O14867 736 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 GALR2O43603 387 aaPredicted RBP3.81□□□□□ -1.8
TRAV39-201ENST00000390466 PRKAB2O43741 272 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 TACC1O75410 805 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 PRDM1O75626 825 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 NOL4O94818 638 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 KIAA0754O94854 1291 aa3.81□□□□□ -1.8
TRAV39-201ENST00000390466 MBD4O95243 580 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms