RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 EIF2AK2P19525 551 aaKnown RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 HSD17B4P51659 736 aa12.87□□□□□ -0.35
TRAV3-201ENST00000390425 MRPL12P52815 198 aaKnown RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 PTH1RQ03431 593 aa12.87□□□□□ -0.35
TRAV3-201ENST00000390425 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
TRAV3-201ENST00000390425 IWS1Q96ST2 819 aa12.87□□□□□ -0.35
TRAV3-201ENST00000390425 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 PXMP2Q9NR77 195 aa12.87□□□□□ -0.35
TRAV3-201ENST00000390425 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
TRAV3-201ENST00000390425 SIP14410 1827 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
TRAV3-201ENST00000390425 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 RGS20O76081 388 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 CFBP00751 764 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 IQCF3P0C7M6 154 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 ATP2A2P16615 1042 aaKnown RBP12.86□□□□□ -0.35
TRAV3-201ENST00000390425 GPNMBQ14956 572 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 STXBP2Q15833 593 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 GDF6Q6KF10 455 aaPredicted RBP12.86□□□□□ -0.35
TRAV3-201ENST00000390425 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 SESTD1Q86VW0 696 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 IL31RAQ8NI17 732 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 DHX38Q92620 1227 aaKnown RBP12.86□□□□□ -0.35
TRAV3-201ENST00000390425 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
TRAV3-201ENST00000390425 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 CYTH3O43739 400 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 NR3C2P08235 984 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 CHMLP26374 656 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 RFC2P35250 354 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 GRM4Q14833 912 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 PTGISQ16647 500 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 EMID1Q96A84 441 aaPredicted RBP12.85□□□□□ -0.35
TRAV3-201ENST00000390425 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
TRAV3-201ENST00000390425 ZBTB5O15062 677 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 EIF3JO75822 258 aaKnown RBP12.84□□□□□ -0.35
TRAV3-201ENST00000390425 F2P00734 622 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 CA3P07451 260 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 ZNF286BP0CG31 522 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 HOXD8P13378 290 aaPredicted RBP12.84□□□□□ -0.35
TRAV3-201ENST00000390425 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
TRAV3-201ENST00000390425 ANTXR2P58335 489 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 PIGSQ96S52 555 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 GTF2IRD1Q9UHL9 959 aa12.84□□□□□ -0.35
TRAV3-201ENST00000390425 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
TRAV3-201ENST00000390425 EPOPA6NHQ4 379 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 HAS3O00219 553 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
TRAV3-201ENST00000390425 IGFBP4P22692 258 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 PSEN2P49810 448 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 RBL2Q08999 1139 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 TROAPQ12815 778 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 BFSP2Q13515 415 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 HIC1Q14526 733 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 PGM5Q15124 567 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
TRAV3-201ENST00000390425 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 SPRED2Q7Z698 418 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 HOMER1Q86YM7 354 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.36
TRAV3-201ENST00000390425 WNT8BQ93098 351 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 HDAC6Q9UBN7 1215 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 MRVI1Q9Y6F6 885 aa12.83□□□□□ -0.36
TRAV3-201ENST00000390425 E7EWF7 191 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 RFXAPO00287 272 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 SGSM2O43147 1006 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 SORBS3O60504 671 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 ACTN1P12814 892 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 SP2Q02086 613 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 MFSD10Q14728 455 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 DGKDQ16760 1214 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 TRIM71Q2Q1W2 868 aaKnown RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 HSDL1Q3SXM5 330 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 TRAF7Q6Q0C0 670 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 LRRC8DQ7L1W4 858 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms