RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 SMARCC2Q8TAQ2 1214 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 BRF1Q92994 677 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 MRVI1Q9Y6F6 885 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 FRMPD4Q14CM0 1322 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 A6NJR5 290 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 SLC34A2O95436 690 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 GH1P01241 217 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 RAG1P15918 1043 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 METAP2P50579 478 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRBV27-201ENST00000390399 PSMC6P62333 389 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 PURAQ00577 322 aaKnown RBP10.31□□□□□ -0.76
TRBV27-201ENST00000390399 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 APOBRQ0VD83 1088 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 USP17L6PQ6QN14 398 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 VSIG10LQ86VR7 867 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 FAM126BQ8IXS8 530 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 SLC43A3Q8NBI5 491 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
TRBV27-201ENST00000390399 BADQ92934 168 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 MTG1Q9BT17 334 aaPredicted RBP10.31□□□□□ -0.76
TRBV27-201ENST00000390399 USP26Q9BXU7 913 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 SEZ6LQ9BYH1 1024 aa10.31□□□□□ -0.76
TRBV27-201ENST00000390399 CEP290O15078 2479 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 NID2Q14112 1375 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 MEIS2O14770 477 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 KPNA6O60684 536 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 RGS20O76081 388 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 CDC27P30260 824 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 FUT2Q10981 343 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 WWC2Q6AWC2 1192 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 PPP1R18Q6NYC8 613 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 KCNV1Q6PIU1 500 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 RUFY3Q7L099 469 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 FBXL16Q8N461 479 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 AFG1LQ8WV93 481 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
TRBV27-201ENST00000390399 PSTPIP2Q9H939 334 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 DDX41Q9UJV9 622 aaKnown RBP10.3□□□□□ -0.76
TRBV27-201ENST00000390399 TBX21Q9UL17 535 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 GRIN2DO15399 1336 aa10.3□□□□□ -0.76
TRBV27-201ENST00000390399 hCG_1984214I3L0E3 225 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 STAM2O75886 525 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 CD4P01730 458 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 MMP3P08254 477 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 UBA1P22314 1058 aaKnown RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 ITGB8P26012 769 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 NAPAP54920 295 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 MRPS9P82933 396 aaKnown RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 FPGSQ05932 587 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 UBE2SQ16763 222 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 GNPTABQ3T906 1256 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 ZNF713Q8N859 430 aaPredicted RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 EMID1Q96A84 441 aaPredicted RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 AGXT2Q9BYV1 514 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 CYP46A1Q9Y6A2 500 aa10.29□□□□□ -0.76
TRBV27-201ENST00000390399 V9GY48 417 aaPredicted RBP10.29□□□□□ -0.76
TRBV27-201ENST00000390399 SPDYE3A6NKU9 549 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 STXBP3O00186 592 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 SOX1O00570 391 aaPredicted RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 SORBS3O60504 671 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 B4GALT4O60513 344 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 GGPS1O95749 300 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 TIMP1P01033 207 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 TGFB3P10600 412 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 ADCY7P51828 1080 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 CHMP4BP1P59074 171 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 DGKDQ16760 1214 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 LRIT3Q3SXY7 679 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 FAM47CQ5HY64 1035 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 PCNX4Q63HM2 1172 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 PPTC7Q8NI37 304 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 INPP4AQ96PE3 977 aaPredicted RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 UPF3BQ9BZI7 483 aaKnown RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 PPP1R12CQ9BZL4 782 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 TRPV6Q9H1D0 765 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 ALDH8A1Q9H2A2 487 aaPredicted RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 EHMT1Q9H9B1 1298 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 RANBP2P49792 3224 aaKnown RBP10.28□□□□□ -0.76
TRBV27-201ENST00000390399 SCN10AQ9Y5Y9 1956 aa10.28□□□□□ -0.76
TRBV27-201ENST00000390399 FIBPO43427 364 aa10.27□□□□□ -0.77
TRBV27-201ENST00000390399 SUPT20HL2P0C7V6 817 aa10.27□□□□□ -0.77
TRBV27-201ENST00000390399 ICAM3P32942 547 aa10.27□□□□□ -0.77
TRBV27-201ENST00000390399 EVCP57679 992 aa10.27□□□□□ -0.77
TRBV27-201ENST00000390399 TOB2Q14106 344 aaPredicted RBP10.27□□□□□ -0.77
TRBV27-201ENST00000390399 SHHQ15465 462 aa10.27□□□□□ -0.77
TRBV27-201ENST00000390399 PFKFB3Q16875 520 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms