RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 CLTBP09497 229 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 CDC27P30260 824 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 EVCP57679 992 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 TLE2Q04725 743 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 CCDC62Q6P9F0 684 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 ZNF274Q96GC6 653 aaPredicted RBP12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 SMCHD1A6NHR9 2005 aa12.6□□□□□ -0.39
TRBV5-5-201ENST00000390372 A6NJR5 290 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 MEIS2O14770 477 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 CPLX1O14810 134 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 MYL3P08590 195 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 BMP8BP34820 402 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 ADCY7P51828 1080 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 IRX5P78411 483 aaPredicted RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 FUT2Q10981 343 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 ITGA7Q13683 1181 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 HABP4Q5JVS0 413 aaKnown RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 TMEM63BQ5T3F8 832 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 PCNX4Q63HM2 1172 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 TMEM39AQ9NV64 488 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 BARHL2Q9NY43 387 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 DDX41Q9UJV9 622 aaKnown RBP12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 MCM3APO60318 1980 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
TRBV5-5-201ENST00000390372 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 ARIH2O95376 493 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 SCG2P13521 617 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 CDK7P50613 346 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 PURAQ00577 322 aaKnown RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 PFKFB3Q16875 520 aaPredicted RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 GDF15Q99988 308 aa12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
TRBV5-5-201ENST00000390372 STXBP3O00186 592 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 FIBPO43427 364 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 SUPT20HL2P0C7V6 817 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 RAG1P15918 1043 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 IFNAR1P17181 557 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 GNA11P29992 359 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 ARHGAP1Q07960 439 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 NEDD9Q14511 834 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 DGKDQ16760 1214 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 AFG1LQ8WV93 481 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 COPS5Q92905 334 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 MLXIPQ9HAP2 919 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 C6orf50Q9HD87 102 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 PDLIM7Q9NR12 457 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
TRBV5-5-201ENST00000390372 ALPK3Q96L96 1907 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 KIAA0355O15063 1070 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 MAFGO15525 162 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 CDKL5O76039 1030 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 RGS20O76081 388 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 PTGS1P23219 599 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 ICAM3P32942 547 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 UBE2SQ16763 222 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 PPTC7Q8NI37 304 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 BICD2Q8TD16 824 aa12.56□□□□□ -0.4
TRBV5-5-201ENST00000390372 KATNAL1Q9BW62 490 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms