RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
SPTBN1-203ENST00000389980 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
SPTBN1-203ENST00000389980 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
SPTBN1-203ENST00000389980 RBBP6Q7Z6E9 1792 aaKnown RBP13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 FDX1P10109 184 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 BMP6P22004 513 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 CIITAP33076 1130 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 STAT3P40763 770 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 MCF2L2Q86YR7 1114 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 IL31RAQ8NI17 732 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 SYTL5Q8TDW5 730 aaPredicted RBP13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 SMARCE1Q969G3 411 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 MAN1B1Q9UKM7 699 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 LOC285556D6RIA3 1793 aa13.74□□□□□ -0.21
SPTBN1-203ENST00000389980 IGLV3-22A0A075B6J6 115 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 MSH4O15457 936 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 PPIL2Q13356 520 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 CUL4BQ13620 913 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 TAAR1Q96RJ0 339 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 KCNH4Q9UQ05 1017 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 CXCL11O14625 94 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 AP5Z1O43299 807 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 DPYDQ12882 1025 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 GRB10Q13322 594 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 PDIA5Q14554 519 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 IQCB1Q15051 598 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
SPTBN1-203ENST00000389980 MOGSQ13724 837 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 BAATQ14032 418 aaPredicted RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 ECM1Q16610 540 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 NT5DC1Q5TFE4 455 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 BTBD7Q9P203 1132 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 EIF2AK2P19525 551 aaKnown RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 OAZ1P54368 228 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 GHRHRQ02643 423 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 PLA2G4DQ86XP0 818 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 SLFN12Q8IYM2 578 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 CALML4Q96GE6 196 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 CCDC34Q96HJ3 373 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 PYM1Q9BRP8 204 aaKnown RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
SPTBN1-203ENST00000389980 RPTORQ8N122 1335 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 CELF2O95319 508 aaKnown RBP13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 ARP10275 920 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 IRX3P78415 501 aaPredicted RBP13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 SPIRE1Q08AE8 756 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 CEP55Q53EZ4 464 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 KRT79Q5XKE5 535 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 PDCL3Q9H2J4 239 aa13.71□□□□□ -0.21
SPTBN1-203ENST00000389980 MYPNQ86TC9 1320 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 ATP2A1O14983 1001 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 SMC2O95347 1197 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 MORC3Q14149 939 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 LBX2Q6XYB7 198 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 KCNK18Q7Z418 384 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 RMDN3Q96TC7 470 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 GBA2Q9HCG7 927 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 PNMA2Q9UL42 364 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 AGTPBP1Q9UPW5 1226 aa13.71□□□□□ -0.22
SPTBN1-203ENST00000389980 BECN2A8MW95 431 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 ESPNB1AK53 854 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 TBX3O15119 743 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 ITGB5P18084 799 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 SMYD4Q8IYR2 804 aaPredicted RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 R3HDMLQ9H3Y0 253 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 A1CFQ9NQ94 594 aaKnown RBP13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
SPTBN1-203ENST00000389980 MEIS1O00470 390 aa13.69□□□□□ -0.22
SPTBN1-203ENST00000389980 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms