RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 AMPD3Q01432 767 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 TDRD12Q587J7 1177 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 KCTD1Q719H9 257 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 ANKRD13CQ8N6S4 541 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 CEP112Q8N8E3 955 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 AGPAT5Q9NUQ2 364 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.25
CAPRIN1-202ENST00000389645 GPS2Q13227 327 aa13.46□□□□□ -0.26
CAPRIN1-202ENST00000389645 SRGAP1Q7Z6B7 1085 aa13.46□□□□□ -0.26
CAPRIN1-202ENST00000389645 VEZTQ9HBM0 779 aa13.46□□□□□ -0.26
CAPRIN1-202ENST00000389645 PI4KBQ9UBF8 816 aa13.46□□□□□ -0.26
CAPRIN1-202ENST00000389645 AKR1B10O60218 316 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 NDUFA10O95299 355 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 POLD1P28340 1107 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 LMAN1P49257 510 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 MRPS25P82663 173 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 SPA17Q15506 151 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CERKLQ49MI3 558 aaPredicted RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 RBM26Q5T8P6 1007 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 SV2BQ7L1I2 683 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC42Q96M95 316 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 PSMD1Q99460 953 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 ERLIN1O75477 346 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 TDP2O95551 362 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 TTLL1O95922 423 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CXCL9Q07325 125 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 RRP1BQ14684 758 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 SEPT2Q15019 361 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 LONRF2Q1L5Z9 754 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 DALRD3Q5D0E6 543 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 ADSSL1Q8N142 457 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 MB21D1Q8N884 522 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 ZNF526Q8TF50 670 aaPredicted RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 MRIQ9BWK5 157 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 HDLBPQ00341 1268 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 NAALADL2Q58DX5 795 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 NELFCDQ8IXH7 590 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 PLEKHA4Q9H4M7 779 aa13.45□□□□□ -0.26
CAPRIN1-202ENST00000389645 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 KRT79Q5XKE5 535 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 ANKRD40Q6AI12 368 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 NIM1KQ8IY84 436 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 LIMA1Q9UHB6 759 aaKnown RBP13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 KRT26Q7Z3Y9 468 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC51Q96ER9 411 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 POLD4Q9HCU8 107 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 NLRC4Q9NPP4 1024 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 CYLC1P35663 651 aaPredicted RBP13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 EPS15P42566 896 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 P2RX5Q93086 422 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 VPS18Q9P253 973 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 ZNRF3Q9ULT6 936 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
CAPRIN1-202ENST00000389645 ADCY7P51828 1080 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 SNAP25P60880 206 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 GMLQ99445 158 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 TRIM9Q9C026 710 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 BICDL2A1A5D9 508 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 SASH3O75995 380 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 NOVP48745 357 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 NBPF9Q3BBW0 867 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 RAB34Q9BZG1 259 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 PDE11AQ9HCR9 933 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 LGALS16A8MUM7 142 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 KRT86O43790 486 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 EGFRP00533 1210 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 DNM2P50570 870 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 KIF5AQ12840 1032 aa13.43□□□□□ -0.26
CAPRIN1-202ENST00000389645 TRIM14Q14142 442 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms