RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 LDHDQ86WU2 507 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 SPON1Q9HCB6 807 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 INPP5BP32019 993 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 FILIP1LQ4L180 1135 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 COBLL1Q53SF7 1204 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 ARHGAP27Q6ZUM4 889 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 GJA10Q969M2 543 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 LENG9Q96B70 501 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 SLF1Q9BQI6 1058 aa28.22■■■□□ 2.11
SHOX2-201ENST00000389589 ICAM1P05362 532 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 ZNF76P36508 570 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 USP14P54578 494 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 ANGEL2Q5VTE6 544 aaKnown RBP28.21■■■□□ 2.11
SHOX2-201ENST00000389589 APTXQ7Z2E3 356 aaKnown RBP28.21■■■□□ 2.11
SHOX2-201ENST00000389589 FCHSD1Q86WN1 690 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 ANKRD20A12PQ8NF67 263 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 ZNF112Q9UJU3 913 aa28.21■■■□□ 2.11
SHOX2-201ENST00000389589 MYMKA6NI61 221 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 FAM86B1E9PN63 330 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 FAM86B2P0C5J1 330 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 DNTTIP2Q5QJE6 756 aaKnown RBP28.2■■■□□ 2.11
SHOX2-201ENST00000389589 HAUS3Q68CZ6 603 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 SPECC1LQ69YQ0 1117 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 UNC13DQ70J99 1090 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 MAPK8IP1Q9UQF2 711 aa28.2■■■□□ 2.11
SHOX2-201ENST00000389589 ERMNQ8TAM6 284 aa28.2■■■□□ 2.1
SHOX2-201ENST00000389589 LIMA1Q9UHB6 759 aaKnown RBP28.2■■■□□ 2.1
SHOX2-201ENST00000389589 PPP2R3BQ9Y5P8 575 aa28.2■■■□□ 2.1
SHOX2-201ENST00000389589 SCYL3Q8IZE3 742 aa28.19■■■□□ 2.1
SHOX2-201ENST00000389589 ADD3Q9UEY8 706 aaKnown RBP28.19■■■□□ 2.1
SHOX2-201ENST00000389589 LRRC10BA6NIK2 292 aa28.19■■■□□ 2.1
SHOX2-201ENST00000389589 TBX2Q13207 712 aaPredicted RBP28.19■■■□□ 2.1
SHOX2-201ENST00000389589 SAMD1Q6SPF0 538 aaPredicted RBP28.19■■■□□ 2.1
SHOX2-201ENST00000389589 CCDC112Q8NEF3 446 aa28.19■■■□□ 2.1
SHOX2-201ENST00000389589 WDR18Q9BV38 432 aa28.19■■■□□ 2.1
SHOX2-201ENST00000389589 AS3MTQ9HBK9 375 aa28.19■■■□□ 2.1
SHOX2-201ENST00000389589 SPIRE1Q08AE8 756 aa28.18■■■□□ 2.1
SHOX2-201ENST00000389589 ECM1Q16610 540 aa28.18■■■□□ 2.1
SHOX2-201ENST00000389589 KCNK18Q7Z418 384 aa28.18■■■□□ 2.1
SHOX2-201ENST00000389589 NOC3LQ8WTT2 800 aaKnown RBP28.18■■■□□ 2.1
SHOX2-201ENST00000389589 CCPG1Q9ULG6 757 aa28.18■■■□□ 2.1
SHOX2-201ENST00000389589 BICDL2A1A5D9 508 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 TRPM4Q8TD43 1214 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 TBC1D5Q92609 795 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 PNMA2Q9UL42 364 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 MSH4O15457 936 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 KCNJ6P48051 423 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 KCND1Q9NSA2 647 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 RABGAP1Q9Y3P9 1069 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 PARP14Q460N5 1801 aa28.17■■■□□ 2.1
SHOX2-201ENST00000389589 RBBP6Q7Z6E9 1792 aaKnown RBP28.16■■■□□ 2.1
SHOX2-201ENST00000389589 STK4Q13043 487 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 PSMD2Q13200 908 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 TCP11X2Q5H9J9 407 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 THAP9Q9H5L6 903 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 BMP2KQ9NSY1 1161 aaPredicted RBP28.16■■■□□ 2.1
SHOX2-201ENST00000389589 KIAA1024Q9UPX6 916 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 ZNF536O15090 1300 aa28.16■■■□□ 2.1
SHOX2-201ENST00000389589 IGLV3-22A0A075B6J6 115 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 CCNE1P24864 410 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 DDX12PQ92771 950 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 TANGO6Q9C0B7 1094 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 PICK1Q9NRD5 415 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 KCNJ18B7U540 433 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 COBLO75128 1261 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 FDX1P10109 184 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 TERF1P54274 439 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 MTMR2Q13614 643 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 KCNJ12Q14500 433 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 KRT31Q15323 416 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 P2RX5Q93086 422 aa28.15■■■□□ 2.1
SHOX2-201ENST00000389589 VCAM1P19320 739 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 HSD17B4P51659 736 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 TTI2Q6NXR4 508 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 MCF2L2Q86YR7 1114 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 TRIM47Q96LD4 638 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 AGBL1Q96MI9 1066 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 WRNIP1Q96S55 665 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 SLC38A10Q9HBR0 1119 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 EMILIN3Q9NT22 766 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 POLR2AP24928 1970 aaKnown RBP28.14■■■□□ 2.1
SHOX2-201ENST00000389589 PHIPQ8WWQ0 1821 aa28.14■■■□□ 2.1
SHOX2-201ENST00000389589 TRIM49BA6NDI0 452 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 FCER1AP12319 257 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 EEF1GP26641 437 aaKnown RBP28.14■■■□□ 2.09
SHOX2-201ENST00000389589 STAT3P40763 770 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 NCAPH2Q6IBW4 605 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 DYMQ7RTS9 669 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 SAMD3Q8N6K7 520 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 UIMC1Q96RL1 719 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 GGA3Q9NZ52 723 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 PPP1R9AQ9ULJ8 1098 aa28.14■■■□□ 2.09
SHOX2-201ENST00000389589 POTEB3A0JP26 581 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 POTECB2RU33 542 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 RPA1P27694 616 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 BACE1P56817 501 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 GHRHRQ02643 423 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 POTEBQ6S5H4 581 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 KCTD17Q8N5Z5 321 aa28.13■■■□□ 2.09
SHOX2-201ENST00000389589 VAV3Q9UKW4 847 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms