RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 DLGAP5Q15398 846 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 UNC13DQ70J99 1090 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 TMEM47Q9BQJ4 181 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 TADA3O75528 432 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 FAM133AQ8N9E0 248 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 K7ENM7 598 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 GRAPQ13588 217 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 CACNA2D3Q8IZS8 1091 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 GRAPLQ8TC17 118 aaPredicted RBP17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 CAPN7Q9Y6W3 813 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 DIP2BQ9P265 1576 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 FTCDO95954 541 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 ABCB5Q2M3G0 1257 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 TSNARE1Q96NA8 513 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 ZBED4O75132 1171 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 GAP43P17677 238 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 ODR4Q5SWX8 454 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.65■□□□□ 0.421e-6■■■■□ 22.5
PTPRN2-201ENST00000389413 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 HPS5Q9UPZ3 1129 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 USTQ9Y2C2 406 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 A0A1B0GTH6 734 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 ANO9A1A5B4 782 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 ORC4O43929 436 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 STAMBPO95630 424 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 PLA2G4BP0C869 781 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 HNRNPH2P55795 449 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 FMR1Q06787 632 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 SREK1Q8WXA9 508 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 RSRC1Q96IZ7 334 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 TEKT3Q9BXF9 490 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 MAK16Q9BXY0 300 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 PNMA6FA0A0J9YX94 578 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 TTC26A0AVF1 554 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 TRIM37O94972 964 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 LIG3P49916 1009 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 ADAT2Q7Z6V5 191 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 LARGE2Q8N3Y3 721 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 EPC1Q9H2F5 836 aa17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 THRAP3Q9Y2W1 955 aaKnown RBP17.65■□□□□ 0.42
PTPRN2-201ENST00000389413 PSMC2P35998 433 aaKnown RBP17.64■□□□□ 0.42
PTPRN2-201ENST00000389413 SEMA3FQ13275 785 aa17.64■□□□□ 0.42
PTPRN2-201ENST00000389413 C10orf76Q5T2E6 689 aa17.64■□□□□ 0.42
PTPRN2-201ENST00000389413 TTC19Q6DKK2 380 aaPredicted RBP17.64■□□□□ 0.42
PTPRN2-201ENST00000389413 PGRMC1O00264 195 aaKnown RBP17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 DCUN1D2Q6PH85 259 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 CCDC63Q8NA47 563 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 SMC6Q96SB8 1091 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 TRPC3Q13507 836 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 MTF1Q14872 753 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 UBE2SQ16763 222 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 KRT26Q7Z3Y9 468 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 KCNG1Q9UIX4 513 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 GRM4Q14833 912 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 LRCH2Q5VUJ6 765 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 NAA35Q5VZE5 725 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 ALS2CLQ60I27 953 aa17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
PTPRN2-201ENST00000389413 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 SERPINB2P05120 415 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 EMBQ6PCB8 327 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 NYAP1Q6ZVC0 841 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 NLRX1Q86UT6 975 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 PBKQ96KB5 322 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 AK9Q5TCS8 1911 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 GYS2P54840 703 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 OTUD6AQ7L8S5 288 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 PHF20Q9BVI0 1012 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 FAM114A2Q9NRY5 505 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 SRGAP2O75044 1071 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 TNNI1P19237 187 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 UAP1Q16222 522 aaPredicted RBP17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 PPM1KQ8N3J5 372 aa17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 MRRFQ96E11 262 aaKnown RBP17.63■□□□□ 0.41
PTPRN2-201ENST00000389413 ATP11AP98196 1134 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 FAM84BQ96KN1 310 aaPredicted RBP17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 GBP1P32455 592 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 MYL7Q01449 175 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 FAM102BQ5T8I3 360 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 LIMA1Q9UHB6 759 aaKnown RBP17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 ADAMTS1Q9UHI8 967 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 PPIP5K2O43314 1243 aa17.62■□□□□ 0.41
PTPRN2-201ENST00000389413 SLC7A5Q01650 507 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms