RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TMC4Q7Z404 712 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 TBC1D1Q86TI0 1168 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 NLRP14Q86W24 1093 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 GJA10Q969M2 543 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 HOMER2Q9NSB8 354 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 COL4A3BPQ9Y5P4 624 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 USP32Q8NFA0 1604 aa14.4□□□□□ -0.1
TRAPPC9-201ENST00000389328 A0A0U1RQJ8 604 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ZNF131P52739 623 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ARHGEF2Q92974 986 aaKnown RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 BICD1Q96G01 975 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 CCDC87Q9NVE4 849 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ATP2A1O14983 1001 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 EXOC3O60645 756 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 FCER1AP12319 257 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 GALNT17Q6IS24 598 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 CROCCP2Q86T23 111 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 DYNLL2Q96FJ2 89 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 AGXT2Q9BYV1 514 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 NT5C3AQ9H0P0 336 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 PPP1R3GB7ZBB8 358 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 USP17L8P0C7I0 530 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 LRRC47Q8N1G4 583 aaKnown RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ACTR5Q9H9F9 607 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 PTPN22Q9Y2R2 807 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 DUSP10Q9Y6W6 482 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 A0A1W2PQC6 194 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 LAD1O00515 517 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 SERPING1P05155 500 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 CYP2J2P51589 502 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 SEC24CP53992 1094 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 UAP1Q16222 522 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 EHD2Q9NZN4 543 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
TRAPPC9-201ENST00000389328 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 USP17L3A6NCW0 530 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 USP17L4A6NCW7 530 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 HIP1RO75146 1068 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 KLK7P49862 253 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 ALX1Q15699 326 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 LRCH2Q5VUJ6 765 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 USP17L1Q7RTZ2 530 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 PSMD14O00487 310 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 CYP2D6P10635 497 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 GBP1P32455 592 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 RFC4P35249 363 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 RPS8P62241 208 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 ANKRD40Q6AI12 368 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 MAGOHBQ96A72 148 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 KANSL2Q9H9L4 492 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 MYO1FO00160 1098 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 PPP1R37O75864 691 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 KRT5P13647 590 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 KRT15P19012 456 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 GLE1Q53GS7 698 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 PPFIBP2Q8ND30 876 aa14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 DDX47Q9H0S4 455 aaKnown RBP14.38□□□□□ -0.11
TRAPPC9-201ENST00000389328 PCP11498 1178 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ZNF18P17022 549 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 MAGOHP61326 146 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 TXNRD1Q16881 649 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 DDX12PQ92771 950 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 KLHL29Q96CT2 875 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ATP8A2Q9NTI2 1148 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 RIMBP2O15034 1052 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 SLC1A4P43007 532 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 CYP4A11Q02928 519 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 USP17L2Q6R6M4 530 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 KCND1Q9NSA2 647 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ALKBH5Q6P6C2 394 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 STMN2Q93045 179 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ATP6V1G3Q96LB4 118 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 FMO2Q99518 471 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 TMOD2Q9NZR1 351 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 HNRNPH1P31943 449 aaKnown RBP14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 USH1GQ495M9 461 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 ADSSL1Q8N142 457 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
TRAPPC9-201ENST00000389328 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 COA7Q96BR5 231 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CCT8L2Q96SF2 557 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 SLC24A3Q9HC58 644 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms