RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 KCNB1Q14721 858 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 CDCA2Q69YH5 1023 aaPredicted RBP16.52■□□□□ 0.23
CTNS-202ENST00000381870 RRAGAQ7L523 313 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 TMTC2Q8N394 836 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 DISC1Q9NRI5 854 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 TRPC6Q9Y210 931 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 C15orf41Q9Y2V0 281 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 PCCAP05165 728 aaPredicted RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 MAGEB6Q8N7X4 407 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 P2RX5Q93086 422 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 RNF14Q9UBS8 474 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 CHD4Q14839 1912 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 PRPF3O43395 683 aaKnown RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 RHOBTB3O94955 611 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 TRIM37O94972 964 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 PAEPP09466 180 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 MAGOHP61326 146 aaKnown RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 MDM1Q8TC05 714 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
CTNS-202ENST00000381870 SPATS2LQ9NUQ6 558 aaKnown RBP16.51■□□□□ 0.23
CTNS-202ENST00000381870 PHRF1Q9P1Y6 1649 aaKnown RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 TNKSO95271 1327 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 KLHL33A6NCF5 533 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 CCT8L1PA6NM43 557 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 ENO4A6NNW6 628 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 ORC4O43929 436 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 FLT3P36888 993 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 BIRC3Q13489 604 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 TAX1BP1Q86VP1 789 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 PARD3BQ8TEW8 1205 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 P3H4Q92791 437 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 ISCUQ9H1K1 167 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 BATF3Q9NR55 127 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 TSKSQ9UJT2 592 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.5■□□□□ 0.23
CTNS-202ENST00000381870 SIK3Q9Y2K2 1263 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 MYBP10242 640 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 TBC1D1Q86TI0 1168 aaPredicted RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 CCDC63Q8NA47 563 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 ZNF570Q96NI8 536 aa16.5■□□□□ 0.23
CTNS-202ENST00000381870 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
CTNS-202ENST00000381870 CCNE1P24864 410 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 EHHADHQ08426 723 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 SEC23AQ15436 765 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 ASTE1Q2TB18 679 aaPredicted RBP16.49■□□□□ 0.23
CTNS-202ENST00000381870 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
CTNS-202ENST00000381870 LONP1P36776 959 aaKnown RBP16.48■□□□□ 0.23
CTNS-202ENST00000381870 RCAN1P53805 252 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 STK4Q13043 487 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 HLFQ16534 295 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 RUFY4Q6ZNE9 571 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 PANK4Q9NVE7 773 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 MYH2Q9UKX2 1941 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 GRID2IPA4D2P6 1211 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 FCER1AP12319 257 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
CTNS-202ENST00000381870 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
CTNS-202ENST00000381870 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
CTNS-202ENST00000381870 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 FAM114A1Q8IWE2 563 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 RNF10Q8N5U6 811 aaKnown RBP16.48■□□□□ 0.23
CTNS-202ENST00000381870 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 USP38Q8NB14 1042 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 TTLL11Q8NHH1 800 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 AGAP11Q8TF27 550 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 CHMP6Q96FZ7 201 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 SLC12A4Q9UP95 1085 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 STRCP1A6NGW2 1772 aa16.48■□□□□ 0.23
CTNS-202ENST00000381870 IRF6O14896 467 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 ATF3P18847 181 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 AGBL2Q5U5Z8 902 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 AP1ARQ63HQ0 302 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 CCDC197Q8NCU1 140 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 MICAL1Q8TDZ2 1067 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 BAP1Q92560 729 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 CCDC47Q96A33 483 aaKnown RBP16.47■□□□□ 0.23
CTNS-202ENST00000381870 SAAL1Q96ER3 474 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 SH3GL3Q99963 347 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms