RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 LGR5O75473 907 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 CHN1P15882 459 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 PTGDRQ13258 359 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 LMNTD2Q8IXW0 634 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 RETREG2Q8NC44 543 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 TAF4BQ92750 862 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 PLIN2Q99541 437 aa20.86■□□□□ 0.93
SMARCD1-201ENST00000381513 A6NHS1 94 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 LIN7AO14910 233 aaPredicted RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 PALMO75781 387 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 ZC3H6P61129 1189 aaKnown RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 ENOX2Q16206 610 aaKnown RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 EARS2Q5JPH6 523 aaKnown RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 CHCHD3Q9NX63 227 aaKnown RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 LRRC23Q53EV4 343 aaPredicted RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 MTRQ99707 1265 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 RNF14Q9UBS8 474 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 C2CD2Q9Y426 696 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 HIP1RO75146 1068 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 PRDM1O75626 825 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 AKAP4Q5JQC9 854 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 PPP1R15BQ5SWA1 713 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 AGBL2Q5U5Z8 902 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 ATG9AQ7Z3C6 839 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 CACNA2D4Q7Z3S7 1137 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 LPIN2Q92539 896 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 CEP126Q9P2H0 1117 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 TSKSQ9UJT2 592 aa20.85■□□□□ 0.93
SMARCD1-201ENST00000381513 WNT7AO00755 349 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 XBP1P17861 261 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 IL15P40933 162 aaPredicted RBP20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 CTDSPL2Q05D32 466 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 IFI16Q16666 785 aaKnown RBP20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 ABTB2Q8N961 1025 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 FAM129AQ9BZQ8 928 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 TRIM31Q9BZY9 425 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 TTYH3Q9C0H2 523 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 STK36Q9NRP7 1315 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 H0YGN5 161 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 PAEPP09466 180 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 ADORA1P30542 326 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 STAT6P42226 847 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 SLC1A4P43007 532 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 DHX9Q08211 1270 aaKnown RBP20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 ERMARDQ5T6L9 678 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 ARHGAP22Q7Z5H3 698 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 CNOT6LQ96LI5 555 aaKnown RBP20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 ISCUQ9H1K1 167 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 CNOT10Q9H9A5 744 aaKnown RBP20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 GOPCQ9HD26 462 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 NFS1Q9Y697 457 aa20.84■□□□□ 0.93
SMARCD1-201ENST00000381513 KRT16P08779 473 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 FLT3P36888 993 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 ADSSL1Q8N142 457 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 LMCD1Q9NZU5 365 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 MLH3Q9UHC1 1453 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 IDH1O75874 414 aaKnown RBP20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 SCARF1Q14162 830 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 PDIA6Q15084 440 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 SPATA21Q7Z572 469 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 AP1M1Q9BXS5 423 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 THAP9Q9H5L6 903 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 LRRC37A3O60309 1634 aa20.83■□□□□ 0.93
SMARCD1-201ENST00000381513 H7C1W4 665 aa20.83■□□□□ 0.92
SMARCD1-201ENST00000381513 GCLCP48506 637 aaPredicted RBP20.83■□□□□ 0.92
SMARCD1-201ENST00000381513 MTMR3Q13615 1198 aa20.83■□□□□ 0.92
SMARCD1-201ENST00000381513 SLC4A4Q9Y6R1 1079 aa20.83■□□□□ 0.92
SMARCD1-201ENST00000381513 KCNK3O14649 394 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 MCM7P33993 719 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 NCALDP61601 193 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 RABL6Q3YEC7 729 aaPredicted RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 LRRC59Q96AG4 307 aaKnown RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 INTS9Q9NV88 658 aaKnown RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 ATP8A1Q9Y2Q0 1164 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 CUL3Q13618 768 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 HLFQ16534 295 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 TTC38Q5R3I4 469 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 HHATQ5VTY9 493 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 GIGYF2Q6Y7W6 1299 aaKnown RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 CCDC85AQ96PX6 553 aaPredicted RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 PUS3Q9BZE2 481 aaKnown RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 NEUROG2Q9H2A3 272 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 DPH5Q9H2P9 285 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 CEP104O60308 925 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 PYGBP11216 843 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 KRT2P35908 639 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 MSH2P43246 934 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 GALNT15Q8N3T1 639 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 CNBD1Q8NA66 436 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 SLC17A8Q8NDX2 589 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 DYDC1Q8WWB3 177 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 PLAGL2Q9UPG8 496 aa20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.82■□□□□ 0.92
SMARCD1-201ENST00000381513 RNF8O76064 485 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms