RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 DNM1LO00429 736 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 DYNC1LI2O43237 492 aaPredicted RBP22.22■■□□□ 1.15
GTF3A-201ENST00000381140 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
GTF3A-201ENST00000381140 NLRP5P59047 1200 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 JAKMIP3Q5VZ66 844 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 VSIG10LQ86VR7 867 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 AP5M1Q9H0R1 490 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 C11orf49Q9H6J7 331 aa22.22■■□□□ 1.15
GTF3A-201ENST00000381140 ORC3Q9UBD5 711 aaPredicted RBP22.22■■□□□ 1.15
GTF3A-201ENST00000381140 FRMPD4Q14CM0 1322 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 MYADML2A6NDP7 307 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 ADAMTS3O15072 1205 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 TXNP10599 105 aaKnown RBP22.21■■□□□ 1.15
GTF3A-201ENST00000381140 TTLL4Q14679 1199 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 UBE2Q1Q7Z7E8 422 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 COPS5Q92905 334 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 ZSCAN31Q96LW9 406 aaPredicted RBP22.21■■□□□ 1.15
GTF3A-201ENST00000381140 ZMYND12Q9H0C1 365 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 GLT8D2Q9H1C3 349 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 EHMT1Q9H9B1 1298 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 RTEL1Q9NZ71 1219 aa22.21■■□□□ 1.15
GTF3A-201ENST00000381140 GNEQ9Y223 722 aaKnown RBP22.21■■□□□ 1.15
GTF3A-201ENST00000381140 STK36Q9NRP7 1315 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 RBM47A0AV96 593 aaKnown RBP22.2■■□□□ 1.14
GTF3A-201ENST00000381140 ESYT2A0FGR8 921 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 JAK2O60674 1132 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 ADAMTS4O75173 837 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 ARIH2O95376 493 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 BEX3Q00994 111 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 ST3GAL1Q11201 340 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 DUSP28Q4G0W2 176 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 FERMT2Q96AC1 680 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 ANO3Q9BYT9 981 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 SENP6Q9GZR1 1112 aaPredicted RBP22.2■■□□□ 1.14
GTF3A-201ENST00000381140 MRVI1Q9Y6F6 885 aa22.2■■□□□ 1.14
GTF3A-201ENST00000381140 GNA11P29992 359 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 FOSBP53539 338 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 GJA9P57773 515 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 MRPS9P82933 396 aaKnown RBP22.19■■□□□ 1.14
GTF3A-201ENST00000381140 LY6KQ17RY6 165 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 GNASQ5JWF2 1037 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 REXO1Q8N1G1 1221 aaKnown RBP22.19■■□□□ 1.14
GTF3A-201ENST00000381140 NSUN7Q8NE18 718 aaKnown RBP22.19■■□□□ 1.14
GTF3A-201ENST00000381140 OR6J1Q8NGC5 347 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 RASGRP4Q8TDF6 673 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 UPF3AQ9H1J1 476 aaKnown RBP22.19■■□□□ 1.14
GTF3A-201ENST00000381140 SH3GLB2Q9NR46 395 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 PDE4DIPQ5VU43 2346 aa22.19■■□□□ 1.14
GTF3A-201ENST00000381140 SORBS3O60504 671 aa22.18■■□□□ 1.14
GTF3A-201ENST00000381140 FOSP01100 380 aaPredicted RBP22.18■■□□□ 1.14
GTF3A-201ENST00000381140 PCNX4Q63HM2 1172 aa22.18■■□□□ 1.14
GTF3A-201ENST00000381140 SH2B1Q9NRF2 756 aaPredicted RBP22.18■■□□□ 1.14
GTF3A-201ENST00000381140 RGS20O76081 388 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 CD2BP2O95400 341 aaKnown RBP22.17■■□□□ 1.14
GTF3A-201ENST00000381140 CLK2P49760 499 aaKnown RBP22.17■■□□□ 1.14
GTF3A-201ENST00000381140 AP3B2Q13367 1082 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 KCNA10Q16322 511 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 IL27Q8NEV9 243 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 BICD2Q8TD16 824 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 WASF1Q92558 559 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 ALG1Q9BT22 464 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 HTATIP2Q9BUP3 242 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 GJB4Q9NTQ9 266 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
GTF3A-201ENST00000381140 MKI67P46013 3256 aaKnown RBP22.17■■□□□ 1.14
GTF3A-201ENST00000381140 NKRFO15226 690 aaKnown RBP eCLIP22.16■■□□□ 1.14
GTF3A-201ENST00000381140 FDPSP14324 419 aaKnown RBP22.16■■□□□ 1.14
GTF3A-201ENST00000381140 ATN1P54259 1190 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-201ENST00000381140 FSCN1Q16658 493 aaKnown RBP22.16■■□□□ 1.14
GTF3A-201ENST00000381140 GNPTABQ3T906 1256 aa22.16■■□□□ 1.14
GTF3A-201ENST00000381140 CCDC62Q6P9F0 684 aa22.16■■□□□ 1.14
GTF3A-201ENST00000381140 KLHDC9Q8NEP7 349 aa22.16■■□□□ 1.14
GTF3A-201ENST00000381140 DPF3Q92784 378 aa22.16■■□□□ 1.14
GTF3A-201ENST00000381140 COL6A1P12109 1028 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 XBP1P17861 261 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 ACLYP53396 1101 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 XRRA1Q6P2D8 792 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 TEX2Q8IWB9 1127 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 DDX41Q9UJV9 622 aaKnown RBP22.15■■□□□ 1.14
GTF3A-201ENST00000381140 PCDHA4Q9UN74 947 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 PHF24Q9UPV7 400 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 Q9Y3F1 56 aa22.15■■□□□ 1.14
GTF3A-201ENST00000381140 CTAGE5O15320 804 aa22.14■■□□□ 1.14
GTF3A-201ENST00000381140 STAM2O75886 525 aa22.14■■□□□ 1.14
GTF3A-201ENST00000381140 GH1P01241 217 aa22.14■■□□□ 1.14
GTF3A-201ENST00000381140 CST5P28325 142 aaPredicted RBP22.14■■□□□ 1.14
GTF3A-201ENST00000381140 NLRX1Q86UT6 975 aa22.14■■□□□ 1.14
GTF3A-201ENST00000381140 PCSK9Q8NBP7 692 aaKnown RBP22.14■■□□□ 1.14
GTF3A-201ENST00000381140 VTI1AQ96AJ9 217 aa22.14■■□□□ 1.14
GTF3A-201ENST00000381140 TNRC18O15417 2968 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-201ENST00000381140 ASGR1P07306 291 aa22.13■■□□□ 1.13
GTF3A-201ENST00000381140 ZNF76P36508 570 aa22.13■■□□□ 1.13
GTF3A-201ENST00000381140 MCTP2Q6DN12 878 aa22.13■■□□□ 1.13
GTF3A-201ENST00000381140 KCNV1Q6PIU1 500 aa22.13■■□□□ 1.13
GTF3A-201ENST00000381140 DHX37Q8IY37 1157 aaKnown RBP22.13■■□□□ 1.13
GTF3A-201ENST00000381140 BLIDQ8IZY5 108 aa22.13■■□□□ 1.13
GTF3A-201ENST00000381140 IPO9Q96P70 1041 aaKnown RBP22.13■■□□□ 1.13
GTF3A-201ENST00000381140 INPP4AQ96PE3 977 aaPredicted RBP22.13■■□□□ 1.13
GTF3A-201ENST00000381140 TSEN34Q9BSV6 310 aaKnown RBP22.13■■□□□ 1.13
GTF3A-201ENST00000381140 PKD2L1Q9P0L9 805 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms