RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 REXO2Q9Y3B8 237 aaKnown RBP14.09□□□□□ -0.15
PUDP-201ENST00000381077 COBLO75128 1261 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 FCER1AP12319 257 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 TRAF1Q13077 416 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 TRAPPC11Q7Z392 1133 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 CEP63Q96MT8 703 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 PURBQ96QR8 312 aaKnown RBP14.08□□□□□ -0.16
PUDP-201ENST00000381077 PITPNM2Q9BZ72 1349 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 PES1O00541 588 aaKnown RBP14.08□□□□□ -0.16
PUDP-201ENST00000381077 LCA5LO95447 670 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 CRKP46108 304 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 TNNI2P48788 182 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 CKAP4Q07065 602 aaKnown RBP14.08□□□□□ -0.16
PUDP-201ENST00000381077 MCM6Q14566 821 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 NDST4Q9H3R1 872 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 PCDHA12Q9UN75 941 aa14.08□□□□□ -0.16
PUDP-201ENST00000381077 G3V3G9 751 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 TBC1D8O95759 1140 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
PUDP-201ENST00000381077 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
PUDP-201ENST00000381077 FKBP3Q00688 224 aaKnown RBP14.07□□□□□ -0.16
PUDP-201ENST00000381077 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 DCAF8Q5TAQ9 597 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 HAUS3Q68CZ6 603 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 TATDN1Q6P1N9 297 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 TMEM179Q6ZVK1 233 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 GMCL1P1Q8NEA9 526 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 DDX12PQ92771 950 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 HAS1Q92839 578 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 NHEJ1Q9H9Q4 299 aaPredicted RBP14.07□□□□□ -0.16
PUDP-201ENST00000381077 KCNMB3Q9NPA1 279 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 SIK3Q9Y2K2 1263 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
PUDP-201ENST00000381077 RASSF10A6NK89 507 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
PUDP-201ENST00000381077 PPP1R11O60927 126 aaPredicted RBP14.06□□□□□ -0.16
PUDP-201ENST00000381077 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 VAV2P52735 878 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 HERVK_113P62684 666 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 GPS2Q13227 327 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 CCDC122Q5T0U0 273 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 WDR93Q6P2C0 686 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 KIAA1328Q86T90 577 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 CCDC65Q8IXS2 484 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 MYOCDQ8IZQ8 938 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 SYN2Q92777 582 aaPredicted RBP14.06□□□□□ -0.16
PUDP-201ENST00000381077 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 GMCL1Q96IK5 515 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
PUDP-201ENST00000381077 SLC39A2Q9NP94 309 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 SERPINA10Q9UK55 444 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 SIPA1L1O43166 1804 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
PUDP-201ENST00000381077 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 MAP2K7O14733 419 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 MMP14P50281 582 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 ZCWPW2Q504Y3 356 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 IQCEQ6IPM2 695 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 LRRC55Q6ZSA7 311 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 RUBCNQ92622 972 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 DNAJC19Q96DA6 116 aa14.06□□□□□ -0.16
PUDP-201ENST00000381077 SSU72P8A0A1W2PR75 194 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 POTEMA6NI47 508 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 PRLRP16471 622 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 SPA17Q15506 151 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 ZC3H3Q8IXZ2 948 aaKnown RBP14.05□□□□□ -0.16
PUDP-201ENST00000381077 ANKZF1Q9H8Y5 726 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 FAM184BQ9ULE4 1060 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 SAR1BQ9Y6B6 198 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 ZNF646O15015 1829 aaPredicted RBP14.05□□□□□ -0.16
PUDP-201ENST00000381077 ATAD5Q96QE3 1844 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 FRMD3A2A2Y4 597 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 TARSL2A2RTX5 802 aaKnown RBP14.05□□□□□ -0.16
PUDP-201ENST00000381077 MARCH6O60337 910 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 SLC1A4P43007 532 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 ITIH3Q06033 890 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 COASYQ13057 564 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 CERKLQ49MI3 558 aaPredicted RBP14.05□□□□□ -0.16
PUDP-201ENST00000381077 Q4G0T1 1027 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 FAM26FQ5R3K3 315 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 CCDC42Q96M95 316 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
PUDP-201ENST00000381077 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 GUCA1BQ9UMX6 200 aa14.05□□□□□ -0.16
PUDP-201ENST00000381077 A0A0U1RQJ8 604 aa14.04□□□□□ -0.16
PUDP-201ENST00000381077 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms