RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
VCX3B-201ENST00000381029 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
VCX3B-201ENST00000381029 SEMA3FQ13275 785 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 PCNX4Q63HM2 1172 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
VCX3B-201ENST00000381029 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 MPHOSPH6Q99547 160 aaKnown RBP17■□□□□ 0.31
VCX3B-201ENST00000381029 C11orf49Q9H6J7 331 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 LIMCH1Q9UPQ0 1083 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
VCX3B-201ENST00000381029 M0R2N6 131 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 CPLX1O14810 134 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 EDIL3O43854 480 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 ADCY7P51828 1080 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 TLK2Q86UE8 772 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 COPS5Q92905 334 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 ZFP91Q96JP5 570 aaPredicted RBP16.99■□□□□ 0.31
VCX3B-201ENST00000381029 TSEN34Q9BSV6 310 aaKnown RBP16.99■□□□□ 0.31
VCX3B-201ENST00000381029 TMEM260Q9NX78 707 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 DDX41Q9UJV9 622 aaKnown RBP16.99■□□□□ 0.31
VCX3B-201ENST00000381029 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 ALPK3Q96L96 1907 aa16.99■□□□□ 0.31
VCX3B-201ENST00000381029 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
VCX3B-201ENST00000381029 CCND2P30279 289 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 ICAM3P32942 547 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 ARHGAP1Q07960 439 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 SNX17Q15036 470 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 XRRA1Q6P2D8 792 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 RNF180Q86T96 592 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
VCX3B-201ENST00000381029 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
VCX3B-201ENST00000381029 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
VCX3B-201ENST00000381029 NKRFO15226 690 aaKnown RBP eCLIP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 DYNC1LI2O43237 492 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 STAM2O75886 525 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 CDKL5O76039 1030 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 TXNP10599 105 aaKnown RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 SREBF1P36956 1147 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 ACLYP53396 1101 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 SP2Q02086 613 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 TTLL4Q14679 1199 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 KCNA10Q16322 511 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 EMID1Q96A84 441 aaPredicted RBP16.97■□□□□ 0.31
VCX3B-201ENST00000381029 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 ANO3Q9BYT9 981 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 UBIAD1Q9Y5Z9 338 aa16.97■□□□□ 0.31
VCX3B-201ENST00000381029 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
VCX3B-201ENST00000381029 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 A6NJR5 290 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 SPATA31C2B4DYI2 1134 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 JAK2O60674 1132 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.31
VCX3B-201ENST00000381029 ITGB5P18084 799 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 BEX3Q00994 111 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 FSCN1Q16658 493 aaKnown RBP16.96■□□□□ 0.31
VCX3B-201ENST00000381029 LRRC26Q2I0M4 334 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 C1orf53Q5VUE5 145 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
VCX3B-201ENST00000381029 GJB4Q9NTQ9 266 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
VCX3B-201ENST00000381029 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 KBTBD13C9JR72 458 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 ASGR1P07306 291 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 TGFB3P10600 412 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 HOXD8P13378 290 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-201ENST00000381029 CCDC148Q8NFR7 591 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 ZSCAN31Q96LW9 406 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-201ENST00000381029 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-201ENST00000381029 BCAS3Q9H6U6 928 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-201ENST00000381029 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
VCX3B-201ENST00000381029 CEP290O15078 2479 aa16.95■□□□□ 0.3
VCX3B-201ENST00000381029 CYP3A4P08684 503 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 UBA1P22314 1058 aaKnown RBP16.94■□□□□ 0.3
VCX3B-201ENST00000381029 GNA11P29992 359 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 GNASQ5JWF2 1037 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 JAKMIP3Q5VZ66 844 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 SLC39A5Q6ZMH5 540 aa16.94■□□□□ 0.3
VCX3B-201ENST00000381029 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
VCX3B-201ENST00000381029 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
VCX3B-201ENST00000381029 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms