RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SGK1O00141 431 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 CIAO1O76071 339 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 SLC7A5Q01650 507 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 CMTR1Q8N1G2 835 aaKnown RBP18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 ELAC2Q9BQ52 826 aaKnown RBP18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 ORC6Q9Y5N6 252 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 PDE6BP35913 854 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 PAGE5Q96GU1 130 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 PSTPIP2Q9H939 334 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 DDX39AO00148 427 aaKnown RBP18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 ADAMTS2O95450 1211 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 CYP21A2P08686 494 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 BSPRYQ5W0U4 402 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 GDAP1Q8TB36 358 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 PTK2Q05397 1052 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 CUL4BQ13620 913 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 KLC4Q9NSK0 619 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 KCNJ6P48051 423 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 PPP2R2AP63151 447 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 ANKRD7Q92527 254 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 VIPAS39Q9H9C1 493 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 MAPK4P31152 587 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 BATF3Q9NR55 127 aa18.52■□□□□ 0.56
COL4A3BP-203ENST00000380494 EXOC1LA0A1B0GW35 172 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 KRT19P08727 400 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 NUGGCQ68CJ6 796 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 RSBN1LQ6PCB5 846 aaPredicted RBP18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZC3H18Q86VM9 953 aaKnown RBP18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 MORC4Q8TE76 937 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 SPARCL1Q14515 664 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 KRT31Q15323 416 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 PPM1KQ8N3J5 372 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 SYT2Q8N9I0 419 aaPredicted RBP18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRIM56Q9BRZ2 755 aaKnown RBP18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 PITPNM3Q9BZ71 974 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 YIPF3Q9GZM5 350 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 ABHD10Q9NUJ1 306 aa18.52■□□□□ 0.55
COL4A3BP-203ENST00000380494 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 IQANK1A0A1B0GTG1 560 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 NR2F2P24468 414 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRIM15Q9C019 465 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 FAM96AQ9H5X1 160 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 MID2Q9UJV3 735 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 PTCH1Q13635 1447 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 GFM2Q969S9 779 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 MRPL46Q9H2W6 279 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 CACYBPQ9HB71 228 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRPA1O75762 1119 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 GSTA1P08263 222 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 GSTA2P09210 222 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 PDE1BQ01064 536 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 GABPAQ06546 454 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 KAZNQ674X7 775 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 CAPRIN2Q6IMN6 1127 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 PPWD1Q96BP3 646 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 SLC24A3Q9HC58 644 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 EEF1DP29692 281 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 LRRC63Q05C16 580 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRIML2Q8N7C3 387 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZC3H15Q8WU90 426 aaKnown RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 TRAIPQ9BWF2 469 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
COL4A3BP-203ENST00000380494 WDR46O15213 610 aaKnown RBP18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 UFL1O94874 794 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 PPP2R5CQ13362 524 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZNF653Q96CK0 615 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 MAD1L1Q9Y6D9 718 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 PFDN6O15212 129 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 SLCO1A2P46721 670 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 KPNA2P52292 529 aaKnown RBP18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 CTSWP56202 376 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 ARMCX5Q6P1M9 558 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 ZNF449Q6P9G9 518 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 NT5C1BQ96P26 610 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 IPO11Q9UI26 975 aaKnown RBP18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 USP14P54578 494 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 RSPH3Q86UC2 560 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 LRRC43Q8N309 656 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 MYCLP12524 364 aaPredicted RBP18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 ARID5BQ14865 1188 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 USH1GQ495M9 461 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 FAM102BQ5T8I3 360 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 DEPTORQ8TB45 409 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 CCDC138Q96M89 665 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 PSD3Q9NYI0 1048 aa18.5■□□□□ 0.55
COL4A3BP-203ENST00000380494 GGA1Q9UJY5 639 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms