RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 POLA2Q14181 598 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 TOM1L2Q6ZVM7 507 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 RASGRP2Q7LDG7 609 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 STK11IPQ8N1F8 1099 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 PPP1R14BQ96C90 147 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 ABCF3Q9NUQ8 709 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 ADAM22Q9P0K1 906 aa10.26□□□□□ -0.77
PTPRA-204ENST00000380393 RGPD5Q99666 1765 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF233A6NK53 670 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 GOLGA8AA7E2F4 631 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 HMGB1P1B2RPK0 211 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 PDGFRBP09619 1106 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 MRPS25P82663 173 aaKnown RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 USH1GQ495M9 461 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 LONRF3Q496Y0 759 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 DUS1LQ6P1R4 473 aaKnown RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 CLASRPQ8N2M8 674 aaKnown RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 KCNMB3Q9NPA1 279 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 MKS1Q9NXB0 559 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 TAF6LQ9Y6J9 622 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ALS2Q96Q42 1657 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 VDRP11473 427 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 PSMA5P28066 241 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 NDUFA8P51970 172 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 EVA1CP58658 441 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 SCUBE1Q8IWY4 988 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ATP6V0A1Q93050 837 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 TAF1DQ9H5J8 278 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ETNK2Q9NVF9 386 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ARHGEF10O15013 1369 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 IGF2BP3O00425 579 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPRA-204ENST00000380393 PYGMP11217 842 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 TMOD1P28289 359 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 RAD23BP54727 409 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 SLC2A7Q6PXP3 512 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 CYP26C1Q6V0L0 522 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 PPFIBP1Q86W92 1011 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 RSPH1Q8WYR4 309 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 PTPRN2Q92932 1015 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 HAUS1Q96CS2 278 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 SNX27Q96L92 541 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 USP44Q9H0E7 712 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 GUCA1BQ9UMX6 200 aa10.25□□□□□ -0.77
PTPRA-204ENST00000380393 ANXA1P04083 346 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 GBP1P32455 592 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 CD97P48960 835 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 PDE4BQ07343 736 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 EZH2Q15910 746 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 CNPY1Q3B7I2 92 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 IQCEQ6IPM2 695 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 FSD1Q9BTV5 496 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 CCDC8Q9H0W5 538 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 BOLA2Q9H3K6 86 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 PHAXQ9H814 394 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 DMGDHQ9UI17 866 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 PA2G4Q9UQ80 394 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 GLRX3O76003 335 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 SULT2A1Q06520 285 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 ZNF362Q5T0B9 420 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 OLFM4Q6UX06 510 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 NLRP3Q96P20 1036 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 FAM192AQ9GZU8 254 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 ZMYND8Q9ULU4 1186 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 TIMM22Q9Y584 194 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 PRC1O43663 620 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 ATP1A1P05023 1023 aaKnown RBP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 SPATA31D3P0C874 917 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 USP11P51784 963 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 INAQ16352 499 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 ODF2Q5BJF6 829 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 IRGCQ6NXR0 463 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 SPATA31D4Q6ZUB0 917 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 AACSQ86V21 672 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 KIF2BQ8N4N8 673 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 IL17REQ8NFR9 667 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPRA-204ENST00000380393 KLHL29Q96CT2 875 aa10.24□□□□□ -0.77
PTPRA-204ENST00000380393 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 BOLA2-SMG1P6H3BVE0 249 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 ITGA2BP08514 1039 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 SCG2P13521 617 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 LMNB1P20700 586 aa10.23□□□□□ -0.77
PTPRA-204ENST00000380393 NMIQ13287 307 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms