RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 EMILIN3Q9NT22 766 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 INTS13Q9NVM9 706 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 ICAM1P05362 532 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 SPP2Q13103 211 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 CDKAL1Q5VV42 579 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 CYP2W1Q8TAV3 490 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 CCPG1Q9ULG6 757 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 DDNO94850 711 aaPredicted RBP22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 VCAM1P19320 739 aa22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 ZNF76P36508 570 aa22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 CCT6AP40227 531 aaKnown RBP22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 PDE4DQ08499 809 aa22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 TANGO6Q9C0B7 1094 aa22.25■■□□□ 1.15
PDLIM5-205ENST00000380180 MYMKA6NI61 221 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 TPD52L1Q16890 204 aaPredicted RBP22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 HYIQ5T013 277 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 VSTM4Q8IW00 320 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 CCDC47Q96A33 483 aaKnown RBP22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 WDR18Q9BV38 432 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 MSH4O15457 936 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 PTPRAP18433 802 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 STAT3P40763 770 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 USP14P54578 494 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 SPIRE1Q08AE8 756 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 FAM20AQ96MK3 541 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 EXOC1Q9NV70 894 aa22.24■■□□□ 1.15
PDLIM5-205ENST00000380180 OFD1O75665 1012 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 FLOT1O75955 427 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 BACE1P56817 501 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 NT5C3AQ9H0P0 336 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 RPAP3Q9H6T3 665 aaPredicted RBP22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 SPTLC3Q9NUV7 552 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 PPP2R3BQ9Y5P8 575 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 KDM3AQ9Y4C1 1321 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 COL11A1P12107 1806 aaPredicted RBP22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 IGLV3-22A0A075B6J6 115 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 ARMCX5Q6P1M9 558 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 APTXQ7Z2E3 356 aaKnown RBP22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 CPXCR1Q8N123 301 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 ZNF280CQ8ND82 737 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 KLRG1Q96E93 195 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 SYT17Q9BSW7 474 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 AS3MTQ9HBK9 375 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 KIAA1024Q9UPX6 916 aa22.23■■□□□ 1.15
PDLIM5-205ENST00000380180 UBXN2AP68543 259 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 STK4Q13043 487 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 STIM1Q13586 685 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 NR1I3Q14994 352 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 DYMQ7RTS9 669 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 SLC38A10Q9HBR0 1119 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 RLFQ13129 1914 aa22.22■■□□□ 1.15
PDLIM5-205ENST00000380180 A0A1B0GTH6 734 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 FCER1AP12319 257 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 CCZ1BP86790 482 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 CCZ1P86791 482 aaPredicted RBP22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 LRRC27Q9C0I9 530 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 RNF181Q9P0P0 153 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 PPP1R9AQ9ULJ8 1098 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 ZHX2Q9Y6X8 837 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 SSC5DA1L4H1 1573 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 PVALEFA0A1B0GWK0 134 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 TRIM49BA6NDI0 452 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 SLC26A4O43511 780 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 MED24O75448 989 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 SKILP12757 684 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 PMS1P54277 932 aaKnown RBP22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 UNC13DQ70J99 1090 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 CCDC150Q8NCX0 1101 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 DDX12PQ92771 950 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 EHMT1Q9H9B1 1298 aa22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 RAVER2Q9HCJ3 691 aaKnown RBP22.21■■□□□ 1.15
PDLIM5-205ENST00000380180 POTEB3A0JP26 581 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 POTECB2RU33 542 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 E9PMD0 336 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 PSMA7O14818 248 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 HSD17B4P51659 736 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 NCAPH2Q6IBW4 605 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 CNNM4Q6P4Q7 775 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 POTEBQ6S5H4 581 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 CLEC4DQ8WXI8 215 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 HPS3Q969F9 1004 aa22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 RBBP6Q7Z6E9 1792 aaKnown RBP22.2■■□□□ 1.14
PDLIM5-205ENST00000380180 NFIBO00712 420 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 ALAS1P13196 640 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 SUPT20HL1Q3ZLR7 823 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 DHTKD1Q96HY7 919 aaPredicted RBP22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 CTAGE1Q96RT6 745 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 GTPBP4Q9BZE4 634 aaKnown RBP22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 ADD3Q9UEY8 706 aaKnown RBP22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 SFPQP23246 707 aaKnown RBP eCLIP22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 HAUS3Q68CZ6 603 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 CATSPER3Q86XQ3 398 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 VAV3Q9UKW4 847 aa22.19■■□□□ 1.14
PDLIM5-205ENST00000380180 YBX3P16989 372 aaKnown RBP eCLIP22.18■■□□□ 1.141e-7■■□□□ 12.5
PDLIM5-205ENST00000380180 KIAA0895Q8NCT3 520 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 ERMNQ8TAM6 284 aa22.18■■□□□ 1.14
PDLIM5-205ENST00000380180 ZFP91Q96JP5 570 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms