RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 DLGAP5Q15398 846 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 UBE2SQ16763 222 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 TMEM119Q4V9L6 283 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 SYDE2Q5VT97 1194 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 SIAH1Q8IUQ4 282 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 LARP4BQ92615 738 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 MBOAT7Q96N66 472 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 ZIC5Q96T25 663 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 GMLQ99445 158 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 TRMT1Q9NXH9 659 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-201ENST00000379340 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 N4BP3O15049 544 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 EDIL3O43854 480 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 MARCH6O60337 910 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 GDF11O95390 407 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 NDUFB10O96000 172 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 CCNE1P24864 410 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 PDE4DQ08499 809 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 PSMD2Q13200 908 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 HYIQ5T013 277 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 FOXR2Q6PJQ5 311 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 MAGEC2Q9UBF1 373 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
POLR2J3-201ENST00000379340 PSMD14O00487 310 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 TBX3O15119 743 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 TEX33O43247 280 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 RAD21O60216 631 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 TBC1D12O60347 775 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 GH2P01242 217 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 ECE1P42892 770 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 DGKZQ13574 1117 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 UNC13DQ70J99 1090 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 LRRC15Q8TF66 581 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 RAD54LQ92698 747 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 P2RX5Q93086 422 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 TRIM47Q96LD4 638 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 PNMA5Q96PV4 448 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 PLIN2Q99541 437 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 SH2D4AQ9H788 454 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 BLOC1S4Q9NUP1 217 aa11.71□□□□□ -0.53
POLR2J3-201ENST00000379340 TRPM7Q96QT4 1865 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 A0A1W2PQC6 194 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 MFAP3LO75121 409 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 FECHP22830 423 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 TTI2Q6NXR4 508 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 NIM1KQ8IY84 436 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 ZNF592Q92610 1267 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 ZNRF3Q9ULT6 936 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 PCDHA12Q9UN75 941 aa11.71□□□□□ -0.54
POLR2J3-201ENST00000379340 PLA2G6O60733 806 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 FGFR1OPO95684 399 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 ADKP55263 362 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 ETF1P62495 437 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 RBL2Q08999 1139 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 IKQ13123 557 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 Q4G0T1 1027 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 SAPCD2Q86UD0 394 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 REXO1L1PQ8IX06 675 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 HAS1Q92839 578 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 IQCDQ96DY2 449 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 KCNMB3Q9NPA1 279 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 TMX2Q9Y320 296 aa11.7□□□□□ -0.54
POLR2J3-201ENST00000379340 ABCB11O95342 1321 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 POTEMA6NI47 508 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 SPDYE3A6NKU9 549 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 TCP10L2B9ZVM9 353 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 MEIS2O14770 477 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 SLURP2P0DP57 97 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 MAP2K2P36507 400 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 SREBF1P36956 1147 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 DNM2P50570 870 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 STAT2P52630 851 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 SOX10P56693 466 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 MCM6Q14566 821 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 HAUS3Q68CZ6 603 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 CIAPIN1Q6FI81 312 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms