RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 FBXO41Q8TF61 875 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 DAPK3O43293 454 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 PYGBP11216 843 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 EIF3BP55884 814 aaKnown RBP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 COPS2P61201 443 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 PSMC4P43686 418 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 PHLDB3Q6NSJ2 640 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC84Q86UT8 332 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 CNBD1Q8NA66 436 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 HIC2Q96JB3 615 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 AZI2Q9H6S1 392 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 NPHP4O75161 1426 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 KCNQ3O43525 872 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 BAG2O95816 211 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 CUL4BQ13620 913 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 TMC4Q7Z404 712 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 NEK9Q8TD19 979 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 BICD1Q96G01 975 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 CENPKQ9BS16 269 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 TCP11L1Q9NUJ3 509 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 USP15Q9Y4E8 981 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-202ENST00000379237 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 ATP7BP35670 1465 aa11.95□□□□□ -0.5
USP6NL-202ENST00000379237 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 AGBL2Q5U5Z8 902 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 HS2ST1Q7LGA3 356 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 IQCKQ8N0W5 287 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ABTB2Q8N961 1025 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 CTNNBL1Q8WYA6 563 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 RBM41Q96IZ5 413 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 SH2D4AQ9H788 454 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ATP6V1G1O75348 118 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF189O75820 626 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 PRCPP42785 496 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 GFPT1Q06210 699 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 SFMBT2Q5VUG0 894 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF570Q96NI8 536 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC194A0A1B0GVG4 234 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 SPDYE3A6NKU9 549 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 TCP11X1B4DZS4 312 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 TPD52L2O43399 206 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 MMP1P03956 469 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ZMYND12Q9H0C1 365 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ABCF3Q9NUQ8 709 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 FGFR1OP2Q9NVK5 253 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 CHMP2BQ9UQN3 213 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 MAP3K7O43318 606 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ATP5DP30049 168 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 SCYL3Q8IZE3 742 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 CCT6BQ92526 530 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 IQCDQ96DY2 449 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 ACSBG1Q96GR2 724 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
USP6NL-202ENST00000379237 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
USP6NL-202ENST00000379237 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 SPHKAPQ2M3C7 1700 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 M0R2C6 588 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 PTGDRQ13258 359 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 MAP7D1Q3KQU3 841 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC92Q53HC0 331 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CDKAL1Q5VV42 579 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 REXO2Q9Y3B8 237 aaKnown RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 UBTFL6P0CB48 400 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CALCOCO2Q13137 446 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CDCA2Q69YH5 1023 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-202ENST00000379237 GALNT15Q8N3T1 639 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CEP70Q8NHQ1 597 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 ACEP12821 1306 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF609O15014 1411 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 A8MUI8 341 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 AMPD3Q01432 767 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 ITIH4Q14624 930 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC152Q4G0S7 254 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms