RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 SLURP2P0DP57 97 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 ERCC3P19447 782 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 HOXA10P31260 410 aaPredicted RBP21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 VAV2P52735 878 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 USP14P54578 494 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 EHHADHQ08426 723 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 LRRC41Q15345 812 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 WDR93Q6P2C0 686 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 LRRC55Q6ZSA7 311 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 EHBP1Q8NDI1 1231 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 SMCR8Q8TEV9 937 aaPredicted RBP21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 DDX12PQ92771 950 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 MXD3Q9BW11 206 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 RIC8AQ9NPQ8 531 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 ARHGAP20Q9P2F6 1191 aa21.7■■□□□ 1.07
SHROOM1-202ENST00000378676 ZNF185O15231 689 aa21.7■■□□□ 1.06
SHROOM1-202ENST00000378676 CLK2P49760 499 aaKnown RBP21.7■■□□□ 1.06
SHROOM1-202ENST00000378676 CASP8Q14790 479 aa21.7■■□□□ 1.06
SHROOM1-202ENST00000378676 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
SHROOM1-202ENST00000378676 IPO7O95373 1038 aaKnown RBP21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 SLC16A2P36021 539 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 MAN2A1Q16706 1144 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 HAS1Q92839 578 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 TTLL1O95922 423 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 HNRNPH3P31942 346 aaKnown RBP21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 SHMT1P34896 483 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 ATP2B2Q01814 1243 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 PDIA5Q14554 519 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 KRT79Q5XKE5 535 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 KRT27Q7Z3Y8 459 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 C2CD5Q86YS7 1000 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 GBP3Q9H0R5 595 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 C10orf71Q711Q0 1435 aa21.69■■□□□ 1.06
SHROOM1-202ENST00000378676 LRRIQ3A6PVS8 624 aaPredicted RBP21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 PDE2AO00408 941 aaPredicted RBP21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 PPP1R18Q6NYC8 613 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 CCDC42Q96M95 316 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 RAB34Q9BZG1 259 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 ZNF772Q68DY9 489 aaPredicted RBP21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 CRAMP1Q96RY5 1269 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 DDX25Q9UHL0 483 aaKnown RBP21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 ADAM21Q9UKJ8 722 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 CAPN6Q9Y6Q1 641 aa21.68■■□□□ 1.06
SHROOM1-202ENST00000378676 EP400Q96L91 3159 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 USP17L10C9JJH3 530 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 LRRC63Q05C16 580 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 PPP4R3AQ6IN85 833 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 SECISBP2LQ93073 1101 aaKnown RBP21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 UIMC1Q96RL1 719 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 MMRN2Q9H8L6 949 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 MLXIPQ9HAP2 919 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 ATAD5Q96QE3 1844 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 ANO9A1A5B4 782 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 LRRC53A6NM62 1247 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 PPEF1O14829 653 aaPredicted RBP21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 KIF11P52732 1056 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 KIF5AQ12840 1032 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 CCDC96Q2M329 555 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 KCTD1Q719H9 257 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 CCDC155Q8N6L0 562 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 DNAJC19Q96DA6 116 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 FGFBP2Q9BYJ0 223 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 VPS18Q9P253 973 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 ABCB11O95342 1321 aa21.67■■□□□ 1.06
SHROOM1-202ENST00000378676 EIF4A3P38919 411 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 SCNN1DP51172 638 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 COASYQ13057 564 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 EIF3JO75822 258 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 TUBBP07437 444 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 CKAP4Q07065 602 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 SPA17Q15506 151 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 BAP1Q92560 729 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 CUL5Q93034 780 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 IQCDQ96DY2 449 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 IFIH1Q9BYX4 1025 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 SH2D4AQ9H788 454 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 USP40Q9NVE5 1235 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 PCDHA13Q9Y5I0 950 aa21.66■■□□□ 1.06
SHROOM1-202ENST00000378676 HNRNPH2P55795 449 aaKnown RBP21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 C2orf54Q08AI8 447 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 ZCWPW2Q504Y3 356 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 RRAGAQ7L523 313 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 TXLNBQ8N3L3 684 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 CAGE1Q8TC20 777 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 TSGA10Q9BZW7 698 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 COA1Q9GZY4 146 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 JADE2Q9NQC1 790 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 FAN1Q9Y2M0 1017 aa21.65■■□□□ 1.06
SHROOM1-202ENST00000378676 COL11A2P13942 1736 aaPredicted RBP21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 MOCS3O95396 460 aa21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 GPS2Q13227 327 aa21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 EXOC4Q96A65 974 aa21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 SWAP70Q9UH65 585 aa21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 MYO3BQ8WXR4 1341 aa21.64■■□□□ 1.05
SHROOM1-202ENST00000378676 MPHOSPH10O00566 681 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms