RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.31
PPM1B-204ENST00000378551 NSUN4Q96CB9 384 aaKnown RBP17.02■□□□□ 0.31
PPM1B-204ENST00000378551 CABS1Q96KC9 395 aa17.02■□□□□ 0.31
PPM1B-204ENST00000378551 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.31
PPM1B-204ENST00000378551 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.31
PPM1B-204ENST00000378551 GOLGA6L10A0A0M3HER8 536 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 GUCY1A3Q02108 690 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 PAK2Q13177 524 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 NFIXQ14938 502 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 E2F5Q15329 346 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 MED4Q9NPJ6 270 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 POTECB2RU33 542 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 ACTN1P12814 892 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 USP14P54578 494 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
PPM1B-204ENST00000378551 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 PIGOQ8TEQ8 1089 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 CTTNBP2NLQ9P2B4 639 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 GFPT2O94808 682 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 DDX47Q9H0S4 455 aaKnown RBP17.01■□□□□ 0.31
PPM1B-204ENST00000378551 ARMCX3Q9UH62 379 aaPredicted RBP17.01■□□□□ 0.31
PPM1B-204ENST00000378551 FEZ2Q9UHY8 353 aaPredicted RBP17.01■□□□□ 0.31
PPM1B-204ENST00000378551 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
PPM1B-204ENST00000378551 FANCGO15287 622 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 CNTNAP5Q8WYK1 1306 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 FBXW10Q5XX13 1052 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 ERMNQ8TAM6 284 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 TACO1Q9BSH4 297 aaKnown RBP17■□□□□ 0.31
PPM1B-204ENST00000378551 TRIM9Q9C026 710 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 MLXIPLQ9NP71 852 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
PPM1B-204ENST00000378551 ZNF211Q13398 564 aaPredicted RBP17■□□□□ 0.31
PPM1B-204ENST00000378551 VWA3BQ502W6 1294 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 MICALCLQ6ZW33 695 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 ADSSL1Q8N142 457 aa17■□□□□ 0.31
PPM1B-204ENST00000378551 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 TUBBP07437 444 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 MYZAPP0CAP1 466 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 TCP1P17987 556 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 CCDC50Q8IVM0 306 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 MED15Q96RN5 788 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 EIF4E1BA6NMX2 242 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SPOPO43791 374 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SEPT7Q16181 437 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 GLIS3Q8NEA6 775 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SPATA4Q8NEY3 305 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 PCIF1Q9H4Z3 704 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 LIMA1Q9UHB6 759 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 COPB2P35606 906 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SEC24CP53992 1094 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 THOC1Q96FV9 657 aaKnown RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
PPM1B-204ENST00000378551 OSBPL9Q96SU4 736 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 JRKLQ9Y4A0 524 aa16.99■□□□□ 0.31
PPM1B-204ENST00000378551 ATP8B1O43520 1251 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 EXOC3O60645 756 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 TUBB2AQ13885 445 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 TUBB2BQ9BVA1 445 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 BAIAP2L1Q9UHR4 511 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 TNFAIP3P21580 790 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 DPH6Q7L8W6 267 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 SRLQ86TD4 932 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 DNM3Q9UQ16 869 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 ZRANB2O95218 330 aaKnown RBP eCLIP16.98■□□□□ 0.31
PPM1B-204ENST00000378551 EPB41P11171 864 aaKnown RBP16.98■□□□□ 0.31
PPM1B-204ENST00000378551 TBC1D31Q96DN5 1066 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 BICD1Q96G01 975 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
PPM1B-204ENST00000378551 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
PPM1B-204ENST00000378551 L1RE1Q9UN81 338 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 WDR19Q8NEZ3 1342 aa16.98■□□□□ 0.31
PPM1B-204ENST00000378551 MDM2Q00987 491 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms