RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 ZNF174Q15697 407 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 FILIP1LQ4L180 1135 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 RIN2Q8WYP3 895 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 FAM84BQ96KN1 310 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 LRRC4BQ9NT99 713 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 GDF11O95390 407 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 CCDC183Q5T5S1 534 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
PCDHGA1-201ENST00000378105 RNF8O76064 485 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 ALOX15P16050 662 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 SESN3P58005 492 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 DIS3L2Q8IYB7 885 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 ARHGEF10LQ9HCE6 1279 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 UBE2HP62256 183 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 TMEM98Q9Y2Y6 226 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 SPTLC2O15270 562 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 SUPT3HO75486 399 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 SYKP43405 635 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 CASP7P55210 303 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 SF3A3Q12874 501 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 PIK3AP1Q6ZUJ8 805 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 LRRC27Q9C0I9 530 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 ZBTB21Q9ULJ3 1066 aa11.94□□□□□ -0.5
PCDHGA1-201ENST00000378105 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 CYP2D6P10635 497 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 GYS1P13807 737 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 KRT2P35908 639 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 SPECC1Q5M775 1068 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 SEMA3EO15041 775 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 FLT3P36888 993 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 FAAH2Q6GMR7 532 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 NSMFQ6X4W1 530 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 KIFC2Q96AC6 838 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 UBE2OQ9C0C9 1292 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 CALML3P27482 149 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 CCDC174Q6PII3 467 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 CALML4Q96GE6 196 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 COA1Q9GZY4 146 aa11.93□□□□□ -0.5
PCDHGA1-201ENST00000378105 GFPT2O94808 682 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 ABL1P00519 1130 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 PDIA5Q14554 519 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 PTPN21Q16825 1174 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 TBC1D10BQ4KMP7 808 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 NSMCE1Q8WV22 266 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 SNRNP27Q8WVK2 155 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 DHX58Q96C10 678 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 DEXIO95424 95 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 FGFR1OPO95684 399 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 GNA11P29992 359 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 KRT40Q6A162 431 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 MTHFD1LQ6UB35 978 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
PCDHGA1-201ENST00000378105 A0A1B0GVL5 298 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 ECE2O60344 883 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 CFBP00751 764 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 CWF19L1Q69YN2 538 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 SERPINB13Q9UIV8 391 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 PFDN1O60925 122 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 MMEP08473 750 aa11.91□□□□□ -0.5
PCDHGA1-201ENST00000378105 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms