RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SNCBQ16143 134 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 HERC4Q5GLZ8 1057 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 MICU3Q86XE3 530 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SLC5A4Q9NY91 659 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 VPS18Q9P253 973 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 BCCIPQ9P287 314 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TEX11Q8IYF3 940 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 KRIT1O00522 736 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CRYMQ14894 314 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 P2RX5Q93086 422 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 GCOM2Q9BZD3 368 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 BARHL2Q9NY43 387 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ADCY9O60503 1353 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TTKP33981 857 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CCT2P78371 535 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 FAM9CQ8IZT9 166 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SERPINI1Q99574 410 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 DLC1Q96QB1 1528 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ADAM9Q13443 819 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 RNF187Q5TA31 235 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TERB1Q8NA31 727 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PGM2Q96G03 612 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ASAP2O43150 1006 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ATG16L1Q676U5 607 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 NELFBQ8WX92 580 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ARHGEF10LQ9HCE6 1279 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SUCLA2Q9P2R7 463 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ATP8A1Q9Y2Q0 1164 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC189A1A4V9 331 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ATP2B4P23634 1241 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 KPNA2P52292 529 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CORO7P57737 925 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ODF2LQ9ULJ1 636 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 OR52Z1P0C646 297 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TKTP29401 623 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TMED1Q13445 227 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SLC10A5Q5PT55 438 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 DAGLBQ8NCG7 672 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 NOP14P78316 857 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC127Q96BQ5 260 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 TAF1DQ9H5J8 278 aaPredicted RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CASP8Q14790 479 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CDKL2Q92772 493 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 UIMC1Q96RL1 719 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 PTGDRQ13258 359 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 INF2Q27J81 1249 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 SUGP1Q8IWZ8 645 aaKnown RBP5.38□□□□□ -1.55
PCDH9-201ENST00000377861 VPS52Q8N1B4 723 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 STK11IPQ8N1F8 1099 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 EPN3Q9H201 632 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 AIPL1Q9NZN9 384 aa5.38□□□□□ -1.55
PCDH9-201ENST00000377861 CCT5P48643 541 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 STRN3Q13033 797 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF654Q8IZM8 581 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MAGEB16A2A368 324 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 TBXAS1P24557 533 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SERPINB3P29508 390 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RFC4P35249 363 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 FKBP1CQ5VVH2 108 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SAAL1Q96ER3 474 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 TRPC7Q9HCX4 862 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 KANSL1LA0AUZ9 987 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 PPARGP37231 505 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MREGQ8N565 214 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SH3TC2Q8TF17 1288 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RABEP2Q9H5N1 569 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MPHOSPH10O00566 681 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RGS16O15492 202 aaPredicted RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 UNC13DQ70J99 1090 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 NOP53Q9NZM5 478 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 STRIP2Q9ULQ0 834 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 AP3M1Q9Y2T2 418 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF233A6NK53 670 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 NAPAP54920 295 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 AGBL2Q5U5Z8 902 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MB21D1Q8N884 522 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 HPSEQ9Y251 543 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SARSP49591 514 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 PAGR1Q9BTK6 254 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 TRIM33Q9UPN9 1127 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CDH16O75309 829 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RIT2Q99578 217 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 RBM42Q9BTD8 480 aaKnown RBP5.37□□□□□ -1.55
PCDH9-201ENST00000377861 NRBP2Q9NSY0 501 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 USP6P35125 1406 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 HSPA13P48723 471 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 MTHFD1LQ6UB35 978 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 BRD8Q9H0E9 1235 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 EFNA5P52803 228 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 TIMM10P62072 90 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 SERPINB12Q96P63 405 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 CARD6Q9BX69 1037 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 STK33Q9BYT3 514 aa5.37□□□□□ -1.55
PCDH9-201ENST00000377861 PRKAA2P54646 552 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms