RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 GNA11P29992 359 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 MTIF2P46199 727 aaKnown RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 MRPS25P82663 173 aaKnown RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 GIMAP7Q8NHV1 300 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 EYA3Q99504 573 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 ZNHIT6Q9NWK9 470 aaKnown RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 DUSP10Q9Y6W6 482 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 PPP1R2P41236 205 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 SATB1Q01826 763 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 MAP9Q49MG5 647 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 RPAINQ86UA6 219 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 TBCKQ8TEA7 893 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 ZNF263O14978 683 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 LDHCP07864 332 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 PDCLQ13371 301 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 GRAPQ13588 217 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 BTDP43251 543 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 AMPD3Q01432 767 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 CYP27A1Q02318 531 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 CNNM4Q6P4Q7 775 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 ARHGEF1Q92888 912 aaKnown RBP15.33■□□□□ 0.04
SF1-205ENST00000377394 PIGSQ96S52 555 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 ZNF287Q9HBT7 754 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
SF1-205ENST00000377394 SETQ01105 290 aaPredicted RBP15.33■□□□□ 0.04
SF1-205ENST00000377394 GRB10Q13322 594 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 FKBP15Q5T1M5 1219 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 ZNF804AQ7Z570 1209 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
SF1-205ENST00000377394 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
SF1-205ENST00000377394 PDE2AO00408 941 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 NDUFAB1O14561 156 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 ZNF185O15231 689 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 HNRNPH3P31942 346 aaKnown RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 NOVP48745 357 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 ACTN3Q08043 901 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 CCNI2Q6ZMN8 369 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 C15orf52Q6ZUT6 534 aaKnown RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 OTUD6BQ8N6M0 293 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 N4BP2L2Q92802 583 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 RPGRIP1Q96KN7 1286 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 PCMTD1Q96MG8 357 aaPredicted RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 SLC39A2Q9NP94 309 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 TMEM260Q9NX78 707 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 GPR75-ASB3A0A0A6YYF3 556 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 ANO9A1A5B4 782 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
SF1-205ENST00000377394 EDIL3O43854 480 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 ELF1P32519 619 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 VAV2P52735 878 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 ARL8AQ96BM9 186 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 SIK3Q9Y2K2 1263 aa15.32■□□□□ 0.04
SF1-205ENST00000377394 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 MYMKA6NI61 221 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 PLEKP08567 350 aaPredicted RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 RTCBQ9Y3I0 505 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 EPHB6O15197 1021 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 TXKP42681 527 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 ATP1A2P50993 1020 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 EZH2Q15910 746 aaKnown RBP15.31■□□□□ 0.04
SF1-205ENST00000377394 SND1Q7KZF4 910 aaKnown RBP eCLIP15.31■□□□□ 0.04
SF1-205ENST00000377394 SV2BQ7L1I2 683 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 MIEF2Q96C03 454 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 CENPHQ9H3R5 247 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 RIOX1Q9H6W3 641 aa15.31■□□□□ 0.04
SF1-205ENST00000377394 MACROD2A1Z1Q3 448 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 PAX7P23759 505 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 VWA3BQ502W6 1294 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 TEX11Q8IYF3 940 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 SH3GL2Q99962 352 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 UBA5Q9GZZ9 404 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 ARHGAP20Q9P2F6 1191 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 C21orf2O43822 256 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.044e-18■■□□□ 13.9
SF1-205ENST00000377394 RHBDL3P58872 404 aa15.3■□□□□ 0.04
SF1-205ENST00000377394 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms